RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 GOT1L1Q8NHS2 421 aaPredicted RBP27.25■■□□□ 1.95
SAMD1-202ENST00000533683 GRIP2Q9C0E4 1043 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 PREBQ9HCU5 417 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 SPASTQ9UBP0 616 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 ZNF282Q9UDV7 671 aaPredicted RBP27.25■■□□□ 1.95
SAMD1-202ENST00000533683 PLPP1O14494 284 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 NTRK1P04629 796 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 NUDT7P0C024 238 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 TPP2P29144 1249 aaPredicted RBP27.25■■□□□ 1.95
SAMD1-202ENST00000533683 RPL3P39023 403 aaKnown RBP27.25■■□□□ 1.95
SAMD1-202ENST00000533683 REEP5Q00765 189 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 DEPDC1Q5TB30 811 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 KHDRBS2Q5VWX1 349 aaKnown RBP27.25■■□□□ 1.95
SAMD1-202ENST00000533683 FAM124AQ86V42 546 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 ADHFE1Q8IWW8 467 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 SIPA1Q96FS4 1042 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 MS4A8Q9BY19 250 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 XKR8Q9H6D3 395 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 CORO2BQ9UQ03 480 aa27.25■■□□□ 1.95
SAMD1-202ENST00000533683 IL3P08700 152 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 MAGEA2P43356 314 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 SPIDRQ14159 915 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 PRSS53Q2L4Q9 553 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 HS3ST5Q8IZT8 346 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 RAB42Q8N4Z0 105 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 ZNF717Q9BY31 904 aaPredicted RBP27.24■■□□□ 1.95
SAMD1-202ENST00000533683 EPB41L1Q9H4G0 881 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 CLK4Q9HAZ1 481 aaKnown RBP27.24■■□□□ 1.95
SAMD1-202ENST00000533683 AHSPQ9NZD4 102 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 PIAS3Q9Y6X2 628 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 SMIM31A0A1B0GVY4 71 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 CACNB4O00305 520 aaPredicted RBP27.24■■□□□ 1.95
SAMD1-202ENST00000533683 OR6B1O95007 311 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 C6orf47O95873 294 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 NADK2Q4G0N4 442 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 DDX59Q5T1V6 619 aaKnown RBP eCLIP27.24■■□□□ 1.95
SAMD1-202ENST00000533683 USP51Q70EK9 711 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 OFCC1Q8IZS5 231 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 SVOPLQ8N434 492 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 SDCCAG3Q96C92 435 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 MTERF3Q96E29 417 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 F2RL3Q96RI0 385 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 SPATA9Q9BWV2 254 aa27.24■■□□□ 1.95
SAMD1-202ENST00000533683 HEATR5BQ9P2D3 2071 aa27.23■■□□□ 1.95
SAMD1-202ENST00000533683 OR52A4PA6NMU1 304 aa27.23■■□□□ 1.95
SAMD1-202ENST00000533683 SCAMP1O15126 338 aa27.23■■□□□ 1.95
SAMD1-202ENST00000533683 GPR37L1O60883 481 aa27.23■■□□□ 1.95
SAMD1-202ENST00000533683 RAB28P51157 221 aa27.23■■□□□ 1.95
SAMD1-202ENST00000533683 PPP1R8Q12972 351 aaKnown RBP27.23■■□□□ 1.95
SAMD1-202ENST00000533683 VEZF1Q14119 521 aa27.23■■□□□ 1.95
SAMD1-202ENST00000533683 ZIK1Q3SY52 487 aaPredicted RBP27.23■■□□□ 1.95
SAMD1-202ENST00000533683 LARP7Q4G0J3 582 aaKnown RBP eCLIP27.23■■□□□ 1.951e-7■■□□□ 12.2
SAMD1-202ENST00000533683 TTC33Q6PID6 262 aaPredicted RBP27.23■■□□□ 1.95
SAMD1-202ENST00000533683 MMP21Q8N119 569 aa27.23■■□□□ 1.95
SAMD1-202ENST00000533683 SCML1Q9UN30 329 aa27.23■■□□□ 1.95
SAMD1-202ENST00000533683 H0YAE9 185 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 KCNJ13O60928 360 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 SEMA3DO95025 777 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 HPRP00739 348 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 ALBP02768 609 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 CTBSQ01459 385 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 CCNYL2Q5T2Q4 361 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 ZNF852Q6ZMS4 543 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 IKBIPQ70UQ0 350 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 TMEM179BQ7Z7N9 219 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 PATL1Q86TB9 770 aaKnown RBP27.22■■□□□ 1.95
SAMD1-202ENST00000533683 ZDHHC21Q8IVQ6 265 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 NAGSQ8N159 534 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 ZNF786Q8N393 782 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 SMRP1Q8NCR6 262 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 SMURF2Q9HAU4 748 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 FGF22Q9HCT0 170 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 RTCAO00442 366 aaKnown RBP27.22■■□□□ 1.95
SAMD1-202ENST00000533683 SEC24DO94855 1032 aaPredicted RBP27.22■■□□□ 1.95
SAMD1-202ENST00000533683 THRBP10828 461 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 LPCAT2Q7L5N7 544 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 SCARF2Q96GP6 870 aaPredicted RBP27.22■■□□□ 1.95
SAMD1-202ENST00000533683 TSC22D3Q99576 134 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 OSBPL10Q9BXB5 764 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 NT5DC2Q9H857 520 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 CD93Q9NPY3 652 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 PRDM8Q9NQV8 689 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 GPATCH2Q9NW75 528 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 NDUFA13Q9P0J0 144 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 RPS6KA6Q9UK32 745 aa27.22■■□□□ 1.95
SAMD1-202ENST00000533683 POM121BA6NF01 834 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 PDZK1P1A8MUH7 402 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 MVDP53602 400 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 NR1H2P55055 460 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 MYBPC3Q14896 1274 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 CNPY1Q3B7I2 92 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 UAP1L1Q3KQV9 507 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 SPESP1Q6UW49 350 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 OR2A1Q8NGT9 310 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 MAL2Q969L2 176 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 NECTIN4Q96NY8 510 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 IL1RAPQ9NPH3 570 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 BSGP35613 385 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 DCTP40126 519 aa27.21■■□□□ 1.95
SAMD1-202ENST00000533683 CSNK1G2P78368 415 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms