RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 EFNA3P52797 238 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 LAPTM5Q13571 262 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 RASA2Q15283 850 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 DCAF10Q5QP82 559 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 TCTN3Q6NUS6 607 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 NIPAL1Q6NVV3 410 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 KIRREL2Q6UWL6 708 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 ABHD13Q7L211 337 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 PRSS58Q8IYP2 241 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 SHISA5Q8N114 240 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 OR51Q1Q8NH59 317 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 ACMSDQ8TDX5 336 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 AENQ8WTP8 325 aaKnown RBP19.35■□□□□ 0.69
CCS-208ENST00000533244 FER1L6-AS2Q96M78 137 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 MRPL46Q9H2W6 279 aaKnown RBP19.35■□□□□ 0.69
CCS-208ENST00000533244 TNPO3Q9Y5L0 923 aaKnown RBP19.35■□□□□ 0.69
CCS-208ENST00000533244 URADA6NGE7 173 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 IDSB3KWA1 339 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 STX16-NPEPL1H3BU86 382 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 E2F3O00716 465 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 STX16O14662 325 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 CYC1P08574 325 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 HSD17B3P37058 310 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 RBBP7Q16576 425 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 ADPRMQ3LIE5 342 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 DEFB134Q4QY38 66 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 PAGE2BQ5JRK9 111 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 ADNP2Q6IQ32 1131 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 TEX9Q8N6V9 391 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 PTGR2Q8N8N7 351 aaPredicted RBP19.34■□□□□ 0.69
CCS-208ENST00000533244 SCYL1Q96KG9 808 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 YIPF2Q9BWQ6 316 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 KLHL31Q9H511 634 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 HCN3Q9P1Z3 774 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 PCDH17O14917 1159 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 SIX3O95343 332 aaPredicted RBP19.34■□□□□ 0.69
CCS-208ENST00000533244 HNRNPH1P31943 449 aaKnown RBP19.34■□□□□ 0.69
CCS-208ENST00000533244 CCL11P51671 97 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 EMP2P54851 167 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 SOX8P57073 446 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 SKP1P63208 163 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 TOR1AIP1Q5JTV8 583 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 LAS2Q8IYD9 372 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 OR11G2Q8NGC1 345 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 GAL3ST3Q96A11 431 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 MESP1Q9BRJ9 268 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 CLK4Q9HAZ1 481 aaKnown RBP19.34■□□□□ 0.69
CCS-208ENST00000533244 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.34■□□□□ 0.69
CCS-208ENST00000533244 TBK1Q9UHD2 729 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 FBXL4Q9UKA2 621 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 TP53TG5Q9Y2B4 290 aa19.34■□□□□ 0.69
CCS-208ENST00000533244 V9GYY5 206 aaPredicted RBP19.34■□□□□ 0.69
CCS-208ENST00000533244 LRIT2A6NDA9 550 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 ZNF860A6NHJ4 632 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 ANKDD1BA6NHY2 528 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 K7EM74 188 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 JRKO75564 520 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 B3GALT4O96024 378 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 XCR1P46094 333 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 RAB8AP61006 207 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 STXBP1P61764 594 aaKnown RBP19.33■□□□□ 0.68
CCS-208ENST00000533244 GTF2H2Q13888 395 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 GRHL2Q6ISB3 625 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 GTF2H2CQ6P1K8 395 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 EMBQ6PCB8 327 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 TMEM205Q6UW68 189 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 SH2D5Q6ZV89 423 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 OR5T3Q8NGG3 340 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 MS4A6EQ96DS6 147 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 OR1F2PQ96R84 312 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 TMEM216Q9P0N5 145 aa19.33■□□□□ 0.68
CCS-208ENST00000533244 ZNF462Q96JM2 2506 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 LOC102723996A0A087X1L8 192 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 UGDHO60701 494 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 DNAJB6O75190 326 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 SMIM24O75264 130 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 PDGFAP04085 211 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 HEXBP07686 556 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 NUDT17P0C025 328 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 IL10P22301 178 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 EEF1DP29692 281 aaKnown RBP19.32■□□□□ 0.68
CCS-208ENST00000533244 HNF4AP41235 474 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 PIK3CGP48736 1102 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 C19orf57Q0VDD7 668 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 NFATC3Q12968 1075 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 HIST2H2ACQ16777 129 aaPredicted RBP19.32■□□□□ 0.68
CCS-208ENST00000533244 ERCC6LQ2NKX8 1250 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 TUBB8Q3ZCM7 444 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 LACTB2Q53H82 288 aaPredicted RBP19.32■□□□□ 0.68
CCS-208ENST00000533244 LIPJQ5W064 366 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 HIST2H2AA3Q6FI13 130 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 GOLGA7Q7Z5G4 137 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 CLEC1AQ8NC01 280 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 FDCSPQ8NFU4 85 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 CAVIN3Q969G5 261 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 UBE2E3Q969T4 207 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 PHF21BQ96EK2 531 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 SLC25A23Q9BV35 468 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 C1QTNF3Q9BXJ4 246 aa19.32■□□□□ 0.68
CCS-208ENST00000533244 VN1R1Q9GZP7 353 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms