RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CDH13P55290 713 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 MC1RQ01726 317 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 CDC20Q12834 499 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 IL10RAQ13651 578 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 ERV3-1Q14264 604 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 HERC3Q15034 1050 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 NKG7Q16617 165 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 SYT16Q17RD7 645 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 ADPRMQ3LIE5 342 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 TOR1AIP1Q5JTV8 583 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 ATP1A1-AS1Q5TC04 95 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 GPR155Q7Z3F1 870 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 CROCCP2Q86T23 111 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 MYLK4Q86YV6 388 aaPredicted RBP11.37□□□□□ -0.59
SSBP3-214ENST00000533209 SHISA5Q8N114 240 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 RDH11Q8TC12 318 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 ADAMTS17Q8TE56 1095 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 UTP15Q8TED0 518 aaKnown RBP11.37□□□□□ -0.59
SSBP3-214ENST00000533209 ZNF473Q8WTR7 871 aaKnown RBP11.37□□□□□ -0.59
SSBP3-214ENST00000533209 CCT6BQ92526 530 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 UBE2E3Q969T4 207 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 ATP6V1E2Q96A05 226 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 SMIM10Q96HG1 83 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 CDK15Q96Q40 435 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 SMC6Q96SB8 1091 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 SPSB2Q99619 263 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 WDR54Q9H977 334 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 ANKHQ9HCJ1 492 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 SENP1Q9P0U3 644 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 SLC17A7Q9P2U7 560 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 PTRH2Q9Y3E5 179 aaKnown RBP11.37□□□□□ -0.59
SSBP3-214ENST00000533209 NAALAD2Q9Y3Q0 740 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 TSC22D4Q9Y3Q8 395 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 MAP4K5Q9Y4K4 846 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 ZFYVE26Q68DK2 2539 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 A0A1B0GTL3 188 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 LRIT2A6NDA9 550 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 URADA6NGE7 173 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 ZNF860A6NHJ4 632 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 H0YIG0 161 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 H0YIV9 168 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 SGK494L7N484 410 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 FFAR3O14843 346 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 GPR42O15529 346 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 PRPF4O43172 522 aaKnown RBP eCLIP11.36□□□□□ -0.59
SSBP3-214ENST00000533209 TYROBPO43914 113 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 RDH16O75452 317 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 SUPT7LO94864 414 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 KLHL18O94889 574 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 CLDN9O95484 217 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 UMODP07911 640 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 PCNAP12004 261 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 RAB8AP61006 207 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 STXBP1P61764 594 aaKnown RBP11.36□□□□□ -0.59
SSBP3-214ENST00000533209 MAT1AQ00266 395 aaKnown RBP11.36□□□□□ -0.59
SSBP3-214ENST00000533209 CLCQ05315 142 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 ZRSR2Q15696 482 aaKnown RBP11.36□□□□□ -0.59
SSBP3-214ENST00000533209 RBBP7Q16576 425 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 CPSF6Q16630 551 aaKnown RBP eCLIP11.36□□□□□ -0.59
SSBP3-214ENST00000533209 UGT8Q16880 541 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 DEFB134Q4QY38 66 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 ABHD13Q7L211 337 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 EXOC3L1Q86VI1 746 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 CCDC63Q8NA47 563 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 ARMC2Q8NEN0 867 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 OR2Y1Q8NGV0 311 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 STT3BQ8TCJ2 826 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 TCP10LQ8TDR4 215 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 TRPC4APQ8TEL6 797 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 GAL3ST3Q96A11 431 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 MS4A6EQ96DS6 147 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 CCDC126Q96EE4 140 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 PGM2Q96G03 612 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 FAM111AQ96PZ2 611 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 MS4A8Q9BY19 250 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 IQCGQ9H095 443 aaKnown RBP11.36□□□□□ -0.59
SSBP3-214ENST00000533209 OXSMQ9NWU1 459 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 TRPC4Q9UBN4 977 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 ZNF282Q9UDV7 671 aaPredicted RBP11.36□□□□□ -0.59
SSBP3-214ENST00000533209 ZNF225Q9UK10 706 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 PADI2Q9Y2J8 665 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 PCDHGA11Q9Y5H2 935 aa11.36□□□□□ -0.59
SSBP3-214ENST00000533209 CDC14CA4D256 554 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 DNAJB6O75190 326 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 OTCP00480 354 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 ZGLP1P0C6A0 271 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 H2AFXP16104 143 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-214ENST00000533209 SERPINB1P30740 379 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 FOLR3P41439 243 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 PIK3CBP42338 1070 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 DNAJB13P59910 316 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 OCA2Q04671 838 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 CASP8Q14790 479 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 PCLAFQ15004 111 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 GGTA1PQ4G0N0 100 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 VWA2Q5GFL6 755 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 FAM219BQ5XKK7 198 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 LETMD1Q6P1Q0 360 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 SHISA6Q6ZSJ9 500 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 UBE3DQ7Z6J8 389 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms