RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 DLX3O60479 287 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 JRKO75564 520 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 DNAJB5O75953 348 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 KLHL18O94889 574 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 GSTA1P08263 222 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 RPS17P08708 135 aaKnown RBP13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 ZNF888P0CJ79 500 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 GSTM2P28161 218 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 OTX2P32243 289 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 AVPR1BP47901 424 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 SLC18A2Q05940 514 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 RGS1Q08116 209 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 GTF2H2Q13888 395 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 GTF2H2CQ6P1K8 395 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 KIRREL2Q6UWL6 708 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 GOLGA7Q7Z5G4 137 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 KRT78Q8N1N4 520 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 TBC1D19Q8N5T2 526 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 L3MBTL4Q8NA19 623 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 OR7G3Q8NG95 312 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 OR5T3Q8NGG3 340 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 OR51Q1Q8NH59 317 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 ZNF473Q8WTR7 871 aaKnown RBP13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 MS4A6EQ96DS6 147 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 SCYL1Q96KG9 808 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 NSUN5Q96P11 429 aaKnown RBP13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 IPPKQ9H8X2 491 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 ANKHQ9HCJ1 492 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 MLXIPLQ9NP71 852 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 MKKSQ9NPJ1 570 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 PCTPQ9UKL6 214 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 TMCO1Q9UM00 188 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 MAN2B2Q9Y2E5 1009 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 TNRC6AQ8NDV7 1962 aaKnown RBP13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 A0A1B0GTL3 188 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 A0A1W2PQ72 361 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 ZNF860A6NHJ4 632 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 ARGFXA6NJG6 315 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 PPP6CO00743 305 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 PRPF4O43172 522 aaKnown RBP eCLIP13.18□□□□□ -0.31e-6■■■■□ 20.9
TSPAN4-220ENST00000532375 CDH16O75309 829 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 RDH16O75452 317 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 CEACAM4O75871 244 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 PRB1P04280 392 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 SERPIND1P05546 499 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 EEF1DP29692 281 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 HNF4AP41235 474 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 RAB8AP61006 207 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 OCA2Q04671 838 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 CHAF1BQ13112 559 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 LAPTM5Q13571 262 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 HERC3Q15034 1050 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 DEFB134Q4QY38 66 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 GRHL2Q6ISB3 625 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 MED25Q71SY5 747 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 RPS27LQ71UM5 84 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 UBE3DQ7Z6J8 389 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 RAB43Q86YS6 212 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 PRSS58Q8IYP2 241 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 TTLQ8NG68 377 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 OR52B6Q8NGF0 335 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 MIEF2Q96C03 454 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 QRFPRQ96P65 431 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 TMEM109Q9BVC6 243 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 ING2Q9H160 280 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 ADNPQ9H2P0 1102 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 LANCL2Q9NS86 450 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 SEMA3GQ9NS98 782 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 P4HTMQ9NXG6 502 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 HCN3Q9P1Z3 774 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 LGALS13Q9UHV8 139 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 TUBD1Q9UJT1 453 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 ZNF225Q9UK10 706 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 RNF11Q9Y3C5 154 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 TSC22D4Q9Y3Q8 395 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 BAHCC1Q9P281 2608 aa13.18□□□□□ -0.3
TSPAN4-220ENST00000532375 CFAP46Q8IYW2 2715 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 OR2W5A6NFC9 320 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 SMIM23A6NLE4 172 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 IDSB3KWA1 339 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 G3V2L1 256 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 UGDHO60701 494 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 SMIM24O75264 130 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 CRHR1P34998 444 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 SOX8P57073 446 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 TRAF3Q13114 568 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 KCNAB2Q13303 367 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 UNC50Q53HI1 259 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 TOR1AIP1Q5JTV8 583 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 LIPJQ5W064 366 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 MED27Q6P2C8 311 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 TMEM205Q6UW68 189 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 IQCKQ8N0W5 287 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 RNF175Q8N4F7 328 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 AMER2Q8N7J2 671 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 TMEM102Q8N9M5 508 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 OR11G2Q8NGC1 345 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 ZNF483Q8TF39 744 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 ABHD17AQ96GS6 310 aa13.17□□□□□ -0.3
TSPAN4-220ENST00000532375 IP6K3Q96PC2 410 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms