RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 TAC3Q9UHF0 121 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 LGALS13Q9UHV8 139 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 GNPTGQ9UJJ9 305 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 CDC14AQ9UNH5 594 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 SH2B3Q9UQQ2 575 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 MED16Q9Y2X0 877 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 PCDHGB6Q9Y5F9 930 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 HRH3Q9Y5N1 445 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 ACTL7BQ9Y614 415 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 ABCA4P78363 2273 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 E7ENX8 843 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 NPIPA5E9PKD4 350 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 FAM227AF5H4B4 570 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 GOLGA8TH3BQL2 631 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 LIASO43766 372 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 PSIP1O75475 530 aaKnown RBP8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 ZNF189O75820 626 aaPredicted RBP8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 TTC4O95801 387 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 SLC16A8O95907 504 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 ZSCAN5DPP0CG00 497 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 DRD4P21917 467 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 CCNFP41002 786 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 KCNJ1P48048 391 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 NR0B1P51843 470 aaKnown RBP8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 ART1P52961 327 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 ITGA8P53708 1063 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 CSNK1G2P78368 415 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 TAP2Q03519 686 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 TLE4Q04727 773 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 RBPJQ06330 500 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 PRDX1Q06830 199 aaKnown RBP8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 FAM53BQ14153 422 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 OR1C1Q15619 314 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 TYSND1Q2T9J0 566 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 BTBD16Q32M84 506 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 ACSBG2Q5FVE4 666 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 AARS2Q5JTZ9 985 aaKnown RBP8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 GKAP1Q5VSY0 366 aaPredicted RBP8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 TTC23LQ6PF05 361 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 CES3Q6UWW8 571 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 PPP1R21Q6ZMI0 780 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 CPEB2Q7Z5Q1 589 aaKnown RBP8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 ANKRD37Q7Z713 158 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 CEP97Q8IW35 865 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 OTUD6BQ8N6M0 293 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 OR9A1PQ8NGU1 263 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 SPATA3Q8NHX4 192 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 EPS8L3Q8TE67 593 aaKnown RBP8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 SMPDL3AQ92484 453 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 PANX3Q96QZ0 392 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 TTC1Q99614 292 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 GSX1Q9H4S2 264 aaPredicted RBP8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 MCCC2Q9HCC0 563 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 PPANQ9NQ55 473 aaKnown RBP8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 NPDC1Q9NQX5 325 aaPredicted RBP8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 RAB6BQ9NRW1 208 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 HCN3Q9P1Z3 774 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 ANAPC5Q9UJX4 755 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 NPIPA1Q9UND3 350 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 FREM3P0C091 2139 aa8.66□□□□□ -1.02
CHMP4A-205ENST00000531158 F8W8V4 182 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 SMAPO00193 183 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 DNALI1O14645 258 aaPredicted RBP8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 PRPF4O43172 522 aaKnown RBP eCLIP8.65□□□□□ -1.021e-6■□□□□ 9.5
CHMP4A-205ENST00000531158 DNAJB6O75190 326 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 CDH16O75309 829 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 VPS26AO75436 327 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 IFNB1P01574 187 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 APRTP07741 180 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 ESRRAP11474 423 aaPredicted RBP8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 ICAM2P13598 275 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 EZRP15311 586 aaKnown RBP8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 CHN1P15882 459 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 IL1RNP18510 177 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 FMO4P31512 558 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 RPA3P35244 121 aaPredicted RBP8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 FDFT1P37268 417 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 XCR1P46094 333 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 CLCN7P51798 805 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 SMSP52788 366 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 SEC24CP53992 1094 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 PNLIPRP1P54315 467 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 SESN2P58004 480 aaPredicted RBP8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 RHAGQ02094 409 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 ALDH6A1Q02252 535 aaKnown RBP8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 RELAQ04206 551 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 RASA2Q15283 850 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 KLHL38Q2WGJ6 581 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 MINDY4Q4G0A6 757 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 ANKRD20A4Q4UJ75 823 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 PCID2Q5JVF3 399 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 CENPUQ71F23 418 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 GALNTL5Q7Z4T8 443 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 LRRC6Q86X45 466 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 CNPY4Q8N129 248 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 MPP5Q8N3R9 675 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 RAB42Q8N4Z0 105 aa8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 CPSF7Q8N684 471 aaKnown RBP8.65□□□□□ -1.02
CHMP4A-205ENST00000531158 PPHLN1Q8NEY8 458 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms