RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 LURAP1Q96LR2 239 aa2.28□□□□□ -2.04
NUP98-218ENST00000530516 RMDN2Q96LZ7 410 aa2.28□□□□□ -2.04
NUP98-218ENST00000530516 GTPBP2Q9BX10 602 aaKnown RBP2.28□□□□□ -2.04
NUP98-218ENST00000530516 SNX25Q9H3E2 840 aa2.28□□□□□ -2.04
NUP98-218ENST00000530516 FNDC4Q9H6D8 234 aaPredicted RBP2.28□□□□□ -2.04
NUP98-218ENST00000530516 JPT2Q9H910 190 aa2.28□□□□□ -2.04
NUP98-218ENST00000530516 RNF121Q9H920 327 aa2.28□□□□□ -2.04
NUP98-218ENST00000530516 POLKQ9UBT6 870 aa2.28□□□□□ -2.04
NUP98-218ENST00000530516 CCL27Q9Y4X3 112 aa2.28□□□□□ -2.04
NUP98-218ENST00000530516 KLK4Q9Y5K2 254 aa2.28□□□□□ -2.04
NUP98-218ENST00000530516 A0A1W2PPW3 197 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 NKX6-3A6NJ46 265 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 PRSS46E5RG02 174 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 MLNRO43193 412 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 ZNF749O43361 778 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 GPRIN2O60269 458 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 ZNF354AO60765 605 aaPredicted RBP2.27□□□□□ -2.05
NUP98-218ENST00000530516 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 RENP00797 406 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 IGKV3-15P01624 115 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 GSK3BP49841 420 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 CALD1Q05682 793 aaKnown RBP2.27□□□□□ -2.05
NUP98-218ENST00000530516 SULT2A1Q06520 285 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 FGD3Q5JSP0 725 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 C6orf136Q5SQH8 315 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 MFSD4BQ5TF39 518 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 ABI3BPQ7Z7G0 1075 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 PRUNE1Q86TP1 453 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 AMIGO1Q86WK6 493 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 OR4N5Q8IXE1 308 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 TEX26Q8N6G2 289 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 RTL3Q8N8U3 475 aaKnown RBP2.27□□□□□ -2.05
NUP98-218ENST00000530516 Q8NFD4 153 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 OR5M9Q8NGP3 310 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 OCC1Q8TAD7 63 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 FER1L6-AS2Q96M78 137 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 ALKBH7Q9BT30 221 aaPredicted RBP2.27□□□□□ -2.05
NUP98-218ENST00000530516 OCR1Q9BZK8 76 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 NKIRAS2Q9NYR9 191 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 KLK11Q9UBX7 282 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 ZNF107Q9UII5 783 aaPredicted RBP2.27□□□□□ -2.05
NUP98-218ENST00000530516 PLCL2Q9UPR0 1127 aa2.27□□□□□ -2.05
NUP98-218ENST00000530516 A0A087WWV3 80 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 IGHV3-16A0A0C4DH30 117 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 A0A1W2PQ72 361 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 A8MU76 341 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 SIGLEC5O15389 551 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 TNFSF12O43508 249 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 KIF5CO60282 957 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 MTRF1O75570 445 aaKnown RBP2.26□□□□□ -2.05
NUP98-218ENST00000530516 HPP00738 406 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 PENKP01210 267 aaPredicted RBP2.26□□□□□ -2.05
NUP98-218ENST00000530516 MT-ND2P03891 347 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 MYL6BP14649 208 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 ERCC2P18074 760 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 PIK3R1P27986 724 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 PKLRP30613 574 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 CDX1P47902 265 aaPredicted RBP2.26□□□□□ -2.05
NUP98-218ENST00000530516 RAD23AP54725 363 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 PTENP60484 403 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 ERVK-16P61578 105 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 IL10RBQ08334 325 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 ITPK1Q13572 414 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 MLF2Q15773 248 aaPredicted RBP2.26□□□□□ -2.05
NUP98-218ENST00000530516 TCP11X2Q5H9J9 407 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 C9orf66Q5T8R8 295 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 FUT10Q6P4F1 479 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 COX8CQ7Z4L0 72 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 GPR141Q7Z602 305 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 KCNMB4Q86W47 210 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 CCAR2Q8N163 923 aaKnown RBP2.26□□□□□ -2.05
NUP98-218ENST00000530516 CSNK1G2-AS1Q8NCQ2 148 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 CD99L2Q8TCZ2 262 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 RAD54LQ92698 747 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 IL12RB2Q99665 862 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 PAPOLGQ9BWT3 736 aaKnown RBP2.26□□□□□ -2.05
NUP98-218ENST00000530516 C5orf66Q9H5L9 145 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 RAB9BQ9NP90 201 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 CHCHD3Q9NX63 227 aaKnown RBP2.26□□□□□ -2.05
NUP98-218ENST00000530516 PRO0461Q9UI25 63 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 AGTPBP1Q9UPW5 1226 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 COLEC10Q9Y6Z7 277 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 GON4LQ3T8J9 2241 aa2.26□□□□□ -2.05
NUP98-218ENST00000530516 E5RGE8 158 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 FAM86B1E9PN63 330 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 LMO7DNF2Z398 122 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 CCDC175P0C221 793 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 FAM86B2P0C5J1 330 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 DUX4L4P0CJ87 422 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 SPP1P10451 314 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 DLATP10515 647 aaKnown RBP2.25□□□□□ -2.05
NUP98-218ENST00000530516 LBPP18428 481 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 BDNFP23560 247 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 PSMA3P25788 255 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 LMO2P25791 158 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 PSMB4P28070 264 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 SSTR1P30872 391 aa2.25□□□□□ -2.05
NUP98-218ENST00000530516 CRKLP46109 303 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms