RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 C16orf47Q6ZP98 133 aaPredicted RBP17.7■□□□□ 0.42
SSRP1-204ENST00000529002 NFAM1Q8NET5 270 aaPredicted RBP17.7■□□□□ 0.42
SSRP1-204ENST00000529002 SREK1Q8WXA9 508 aaKnown RBP17.7■□□□□ 0.42
SSRP1-204ENST00000529002 ARSGQ96EG1 525 aa17.7■□□□□ 0.42
SSRP1-204ENST00000529002 PTCHD1Q96NR3 888 aa17.7■□□□□ 0.42
SSRP1-204ENST00000529002 EBNA1BP2Q99848 306 aaKnown RBP17.7■□□□□ 0.42
SSRP1-204ENST00000529002 REPIN1Q9BWE0 567 aaKnown RBP17.7■□□□□ 0.42
SSRP1-204ENST00000529002 DEFB126Q9BYW3 111 aa17.7■□□□□ 0.42
SSRP1-204ENST00000529002 SLC24A3Q9HC58 644 aa17.7■□□□□ 0.42
SSRP1-204ENST00000529002 DMRT3Q9NQL9 472 aa17.7■□□□□ 0.42
SSRP1-204ENST00000529002 TMEM184CQ9NVA4 438 aa17.7■□□□□ 0.42
SSRP1-204ENST00000529002 KCNE1BA0A087WTH5 132 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 ERI2A8K979 691 aaKnown RBP17.69■□□□□ 0.42
SSRP1-204ENST00000529002 E7EVH7 732 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 G3V3Y1 287 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 PTMAP06454 111 aaKnown RBP17.69■□□□□ 0.42
SSRP1-204ENST00000529002 TPM3P06753 285 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 INHBBP09529 407 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 IMPA1P29218 277 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 ADSLP30566 484 aaPredicted RBP17.69■□□□□ 0.42
SSRP1-204ENST00000529002 KIR2DL3P43628 341 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 PPIAP62937 165 aaKnown RBP17.69■□□□□ 0.42
SSRP1-204ENST00000529002 KLF1Q13351 362 aaPredicted RBP17.69■□□□□ 0.42
SSRP1-204ENST00000529002 CUL1Q13616 776 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 WDR53Q7Z5U6 358 aaPredicted RBP17.69■□□□□ 0.42
SSRP1-204ENST00000529002 ASPGQ86U10 573 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 ACRBPQ8NEB7 543 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 GOT1L1Q8NHS2 421 aaPredicted RBP17.69■□□□□ 0.42
SSRP1-204ENST00000529002 C18orf12Q96KH6 178 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 OR1F2PQ96R84 312 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 FAM114A2Q9NRY5 505 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 KCMF1Q9P0J7 381 aa17.69■□□□□ 0.42
SSRP1-204ENST00000529002 PACSIN2Q9UNF0 486 aaPredicted RBP17.69■□□□□ 0.42
SSRP1-204ENST00000529002 KIAA1549Q9HCM3 1950 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 SAGE2PA6NJ88 616 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 FCHO1O14526 889 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 CHST10O43529 356 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 KIF5CO60282 957 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 IFNB1P01574 187 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 TPM1P09493 284 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 MAOAP21397 527 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 HSD17B2P37059 387 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 CETN2P41208 172 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 MPP1Q00013 466 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 PCID2Q5JVF3 399 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 TMEM156Q8N614 296 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 CAMKVQ8NCB2 501 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 GIMAP7Q8NHV1 300 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 SLC13A3Q8WWT9 602 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 NANOS1Q8WY41 292 aaKnown RBP17.68■□□□□ 0.42
SSRP1-204ENST00000529002 PEX13Q92968 403 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 TBC1D20Q96BZ9 403 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 SMC6Q96SB8 1091 aa17.68■□□□□ 0.42
SSRP1-204ENST00000529002 LIN28AQ9H9Z2 209 aaKnown RBP17.68■□□□□ 0.42
SSRP1-204ENST00000529002 TLN2Q9Y4G6 2542 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 TRBV11-1A0A0K0K1C0 115 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 GOLGA6L9A6NEM1 432 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 A6NNC1 897 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 ZNF839A8K0R7 811 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 ITGA10O75578 1167 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 ZNF189O75820 626 aaPredicted RBP17.67■□□□□ 0.42
SSRP1-204ENST00000529002 VAPBO95292 243 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 PLGLB1Q02325 96 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 DEFB113Q30KQ7 82 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 MEI1Q5TIA1 1274 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 CAPN13Q6MZZ7 669 aaPredicted RBP17.67■□□□□ 0.42
SSRP1-204ENST00000529002 PAMR1Q6UXH9 720 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 B3GNT6Q6ZMB0 384 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 KRTAP1-3Q8IUG1 177 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 MPP5Q8N3R9 675 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 ZNF740Q8NDX6 193 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 MYRIPQ8NFW9 859 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 MBD6Q96DN6 1003 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 MFSD3Q96ES6 412 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 CNPPD1Q9BV87 410 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 NECTIN3Q9NQS3 549 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 RAB6BQ9NRW1 208 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 ZNF223Q9UK11 482 aaPredicted RBP17.67■□□□□ 0.42
SSRP1-204ENST00000529002 FBXW2Q9UKT8 454 aa17.67■□□□□ 0.42
SSRP1-204ENST00000529002 CDK2AP1O14519 115 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 PRKNO60260 465 aaPredicted RBP17.66■□□□□ 0.42
SSRP1-204ENST00000529002 ATE1O95260 518 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 APRTP07741 180 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 UQCRC1P31930 480 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 FDFT1P37268 417 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 NAP1L1P55209 391 aaKnown RBP17.66■□□□□ 0.42
SSRP1-204ENST00000529002 TBPL1P62380 186 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 MEF2AQ02078 507 aaPredicted RBP17.66■□□□□ 0.42
SSRP1-204ENST00000529002 KCTD19Q17RG1 926 aaPredicted RBP17.66■□□□□ 0.42
SSRP1-204ENST00000529002 DEFB134Q4QY38 66 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 CHSY3Q70JA7 882 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 ARMC10Q8N2F6 343 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 PRELID2Q8N945 189 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 APCDD1LQ8NCL9 501 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 FBXO15Q8NCQ5 510 aaPredicted RBP17.66■□□□□ 0.42
SSRP1-204ENST00000529002 ALKBH8Q96BT7 664 aaKnown RBP17.66■□□□□ 0.42
SSRP1-204ENST00000529002 ATG10Q9H0Y0 220 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 CBLCQ9ULV8 474 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 SLC22A7Q9Y694 548 aa17.66■□□□□ 0.42
SSRP1-204ENST00000529002 ARID1AO14497 2285 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms