RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SF3A3Q12874 501 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CSTF3Q12996 717 aaKnown RBP11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 TARDBPQ13148 414 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ADPRMQ3LIE5 342 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 TOR1AIP1Q5JTV8 583 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 DEPDC1Q5TB30 811 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ARHGEF39Q8N4T4 335 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 GBP7Q8N8V2 638 aaPredicted RBP11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CAMKVQ8NCB2 501 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 N4BP2L2Q92802 583 aaPredicted RBP11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 C19orf60Q96EN9 201 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CMTM7Q96FZ5 175 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 LIN37Q96GY3 246 aaPredicted RBP11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CMKLR1Q99788 373 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 WDR55Q9H6Y2 383 aaPredicted RBP11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 MEAF6Q9HAF1 191 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 APMAPQ9HDC9 416 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 PRM3Q9NNZ6 103 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ENAMQ9NRM1 1142 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 GIMAP2Q9UG22 337 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 SLC12A4Q9UP95 1085 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 RUVBL1Q9Y265 456 aaKnown RBP11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ARL2BPQ9Y2Y0 163 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 MRPS2Q9Y399 296 aaKnown RBP11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 LOXL2Q9Y4K0 774 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 KIF26BQ2KJY2 2108 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 C4orf51C9J302 202 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 SLC28A1O00337 649 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 SAP18O00422 153 aaKnown RBP11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 OR2B3O76000 313 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 MED26O95402 600 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 SLC35G6P0C7Q6 338 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 HSD3B1P14060 373 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 PTX3P26022 381 aaPredicted RBP11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 HSD3B2P26439 372 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 AQP5P55064 265 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 MC2RQ01718 297 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 RGS1Q08116 209 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CUL3Q13618 768 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 SLC9B1Q4ZJI4 515 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 TCTE1Q5JU00 501 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 PRAMEF17Q5VTA0 474 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 KHDRBS2Q5VWX1 349 aaKnown RBP11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 EPGNQ6UW88 154 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CCDC121Q6ZUS5 278 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 RAB11FIP2Q7L804 512 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 SPATA21Q7Z572 469 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 UBE3DQ7Z6J8 389 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 TMPRSS12Q86WS5 348 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 HOMEZQ8IX15 550 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CACTIN-AS1Q8N1I8 211 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 MS4A6EQ96DS6 147 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 SERPINI1Q99574 410 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CTRCQ99895 268 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 TRIM55Q9BYV6 548 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ACTR5Q9H9F9 607 aaPredicted RBP11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 KCNK13Q9HB14 408 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 VPS29Q9UBQ0 182 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 DCTN4Q9UJW0 460 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 SERTAD3Q9UJW9 196 aa11.57□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CCDC187A0A096LP49 1063 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 GOLGA8QA0A0J9YX86 632 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 FITM1A5D6W6 292 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 GOLGA8OA6NCC3 632 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 TRPC5OSA6NMA1 111 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 B4E171 279 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 GOLGA8NF8WBI6 632 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 RGS14O43566 566 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 B3GALT4O96024 378 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ITIH1P19827 911 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 EPHA3P29320 983 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ETV5P41161 510 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 TSPAN7P41732 249 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 GCGRP47871 477 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 IDH3AP50213 366 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ITGA1P56199 1179 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 TBL3Q12788 808 aaKnown RBP11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 IMPG1Q17R60 797 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 MANEAQ5SRI9 462 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 TMEM214Q6NUQ4 689 aaKnown RBP11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CHSY3Q70JA7 882 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ZNF655Q8N720 491 aaPredicted RBP11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ZCCHC10Q8TBK6 192 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 UTP15Q8TED0 518 aaKnown RBP11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 PMEPA1Q969W9 287 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 RNF31Q96EP0 1072 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 C10orf90Q96M02 699 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CCT7Q99832 543 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 EBF4Q9BQW3 602 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 SORBS1Q9BX66 1292 aaKnown RBP11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 MRPL1Q9BYD6 325 aaKnown RBP11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 REXO4Q9GZR2 422 aaKnown RBP11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 FANCEQ9HB96 536 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 LHX9Q9NQ69 397 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 FBXO8Q9NRD0 319 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 IRAK4Q9NWZ3 460 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 AKAP7Q9P0M2 348 aaPredicted RBP11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 RARRES3Q9UL19 164 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 IGF2RP11717 2491 aa11.56□□□□□ -0.56
TRAF3IP2-211ENST00000528599 SPTBP11277 2137 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms