RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TRPM3Q9HCF6 1732 aaPredicted RBP5.36□□□□□ -1.55
PCF11-202ENST00000528336 MYOM1P52179 1685 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 SHPRHQ149N8 1683 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 COL22A1Q8NFW1 1626 aaPredicted RBP5.35□□□□□ -1.55
PCF11-202ENST00000528336 MED1Q15648 1581 aaPredicted RBP5.35□□□□□ -1.55
PCF11-202ENST00000528336 NRKQ7Z2Y5 1582 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 MED19A0JLT2 244 aaPredicted RBP5.35□□□□□ -1.55
PCF11-202ENST00000528336 LRRIQ4A6NIV6 560 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 FAM72CH0Y354 149 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 H0YIV9 168 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 RNF113AO15541 343 aaKnown RBP5.35□□□□□ -1.55
PCF11-202ENST00000528336 PRAMEF11O60813 436 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 SLCO2B1O94956 709 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 PDGFBP01127 241 aaPredicted RBP5.35□□□□□ -1.55
PCF11-202ENST00000528336 PENKP01210 267 aaPredicted RBP5.35□□□□□ -1.55
PCF11-202ENST00000528336 KRT5P13647 590 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 PITPNBP48739 271 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 PMP22Q01453 160 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 DPYSQ14117 519 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 FUT11Q495W5 492 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 SPATA46Q5T0L3 261 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 RIPPLY2Q5TAB7 128 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 FAM72AQ5TYM5 149 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 FAM72DQ6L9T8 149 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 TEX38Q6PEX7 206 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 MFSD7Q6UXD7 560 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 TAF8Q7Z7C8 310 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 FAM72BQ86X60 149 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 OR10V1Q8NGI7 309 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 URGCPQ8TCY9 931 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 LPGAT1Q92604 370 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 CASP10Q92851 521 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 TEKT1Q969V4 418 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 SGF29Q96ES7 293 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 HES6Q96HZ4 224 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 LINC00615Q96LM1 132 aaPredicted RBP5.35□□□□□ -1.55
PCF11-202ENST00000528336 INTS14Q96SY0 518 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 TRAF4Q9BUZ4 470 aaPredicted RBP5.35□□□□□ -1.55
PCF11-202ENST00000528336 FNDC11Q9BVV2 318 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 WNT5BQ9H1J7 359 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 MMP27Q9H306 513 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 PANK3Q9H999 370 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 SPASTQ9UBP0 616 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 TCF19Q9Y242 345 aa5.35□□□□□ -1.55
PCF11-202ENST00000528336 AKAP12Q02952 1782 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 MON2Q7Z3U7 1717 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 ALS2Q96Q42 1657 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 NSD3Q9BZ95 1437 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 A0A1B0GWJ7 208 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 XKRY2A2RUG3 117 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 PMS2P5A8MQ11 134 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 HEPACAM2A8MVW5 462 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 SMIM1B2RUZ4 78 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 RASGRF2O14827 1237 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 GPRIN2O60269 458 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 DIAPH2O60879 1101 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 TADA2AO75478 443 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 DIRAS3O95661 229 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 PLGP00747 810 aaPredicted RBP5.34□□□□□ -1.55
PCF11-202ENST00000528336 AMBPP02760 352 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 ETS1P14921 441 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 ANOS1P23352 680 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 AHCYP23526 432 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 DNASE1P24855 282 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 PRKCIP41743 596 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 NR2C2P49116 596 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 PPIGQ13427 754 aaKnown RBP eCLIP5.34□□□□□ -1.559e-6■■□□□ 12.8
PCF11-202ENST00000528336 GFI1BQ5VTD9 330 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 NHLRC1Q6VVB1 395 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 FAM114A1Q8IWE2 563 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 GPALPP1Q8IXQ4 340 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 KLHDC8BQ8IXV7 354 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 KDM8Q8N371 416 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 GUF1Q8N442 669 aaKnown RBP5.34□□□□□ -1.55
PCF11-202ENST00000528336 NHLRC2Q8NBF2 726 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 LPCAT1Q8NF37 534 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 GRAPLQ8TC17 118 aaPredicted RBP5.34□□□□□ -1.55
PCF11-202ENST00000528336 FCAMRQ8WWV6 532 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 TMEM186Q96B77 213 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 PTERQ96BW5 349 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 ZNF524Q96C55 264 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 FBXO17Q96EF6 278 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 EEF2KMTQ96G04 330 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 MOV10L1Q9BXT6 1211 aaKnown RBP5.34□□□□□ -1.55
PCF11-202ENST00000528336 NFKBIZQ9BYH8 718 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 SLC7A5P2Q9GIP4 190 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 GPR88Q9GZN0 384 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 DPAGT1Q9H3H5 408 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 RWDD1Q9H446 243 aaPredicted RBP5.34□□□□□ -1.55
PCF11-202ENST00000528336 OLFML3Q9NRN5 406 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 RBM28Q9NW13 759 aaKnown RBP5.34□□□□□ -1.55
PCF11-202ENST00000528336 OSER1Q9NX31 292 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 TMOD2Q9NZR1 351 aa5.34□□□□□ -1.55
PCF11-202ENST00000528336 CRNNQ9UBG3 495 aaPredicted RBP5.34□□□□□ -1.55
PCF11-202ENST00000528336 SMIM30A4D0T7 59 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 POLR3GO15318 223 aaPredicted RBP5.33□□□□□ -1.56
PCF11-202ENST00000528336 SPRY1O43609 319 aaPredicted RBP5.33□□□□□ -1.56
PCF11-202ENST00000528336 AKAP3O75969 853 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 KRT8P05787 483 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 FGF5P12034 268 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms