RNA–Protein interactions for RNA: ENST00000528142.5

VPS28-209, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS28, Length 1,821 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-209ENST00000528142 DGKBQ9Y6T7 804 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 TRBC2A0A5B9 178 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 C1orf226A1L170 272 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 EVPLLA8MZ36 301 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 H0YJX3 145 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 TPST1O60507 370 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 EPN2O95208 641 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 FCGR1AP12314 374 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 FOLH1Q04609 750 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 KLC1Q07866 573 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 PLD3Q8IV08 490 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 GALNT4Q8N4A0 578 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 CREB3L4Q8TEY5 395 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 JPH3Q8WXH2 748 aaPredicted RBP19.8■□□□□ 0.76
VPS28-209ENST00000528142 GATA6Q92908 595 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 CENPNQ96H22 339 aaPredicted RBP19.8■□□□□ 0.76
VPS28-209ENST00000528142 NR1H4Q96RI1 486 aaPredicted RBP19.8■□□□□ 0.76
VPS28-209ENST00000528142 SLC29A1Q99808 456 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 CHID1Q9BWS9 393 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 LHX9Q9NQ69 397 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 TMEM184CQ9NVA4 438 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 OR6C2Q9NZP2 312 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 DMTF1Q9Y222 760 aa19.8■□□□□ 0.76
VPS28-209ENST00000528142 KRBA1A5PL33 1030 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 FAM149AA5PLN7 773 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 CLEC3AO75596 197 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 SHMT2P34897 504 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 SLC19A1P41440 591 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 MAP7Q14244 749 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 PRSS53Q2L4Q9 553 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 MPEG1Q2M385 716 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 CCNYL2Q5T2Q4 361 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 ADCK2Q7Z695 626 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 UBE3DQ7Z6J8 389 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 AMIGO1Q86WK6 493 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 FBXL6Q8N531 539 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 GOT1L1Q8NHS2 421 aaPredicted RBP19.79■□□□□ 0.76
VPS28-209ENST00000528142 PPCDCQ96CD2 204 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 SEPHS2Q99611 448 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 CIB1Q99828 191 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 VCXQ9H320 206 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 CAAP1Q9H8G2 361 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 ATAD3AQ9NVI7 634 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 KLF15Q9UIH9 416 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 RTCAO00442 366 aaKnown RBP19.79■□□□□ 0.76
VPS28-209ENST00000528142 DENRO43583 198 aaKnown RBP19.79■□□□□ 0.76
VPS28-209ENST00000528142 IL3P08700 152 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 F3P13726 295 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 CKMT2P17540 419 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 CD6P30203 668 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 CCT8P50990 548 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 BLMHQ13867 455 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 LRRC32Q14392 662 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 ATP6AP1Q15904 470 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 ADGRF3Q8IZF5 1079 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 FRMD1Q8N878 549 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 TSTD1Q8NFU3 115 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 OR4E2Q8NGC2 313 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 LCN9Q8WX39 176 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 SARGQ9BW04 601 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 GPR174Q9BXC1 333 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 TWSG1Q9GZX9 223 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 TPT1P8Q9HAU6 139 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 GPR27Q9NS67 375 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 RAB26Q9ULW5 256 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 AK5Q9Y6K8 562 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 V9GYQ6 96 aa19.79■□□□□ 0.76
VPS28-209ENST00000528142 CREG1O75629 220 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 RETP07949 1114 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 CHRM5P08912 532 aaPredicted RBP19.78■□□□□ 0.76
VPS28-209ENST00000528142 BCL6P41182 706 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 MED21Q13503 144 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 ZIC1Q15915 447 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 PPP4R4Q6NUP7 873 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 FAM86B1Q8N7N1 296 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 TTLQ8NG68 377 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 TM4SF18Q96CE8 201 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 ZNF597Q96LX8 424 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 RNF145Q96MT1 663 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 ORAI3Q9BRQ5 295 aa19.78■□□□□ 0.76
VPS28-209ENST00000528142 DCAF13Q9NV06 445 aaKnown RBP19.78■□□□□ 0.76
VPS28-209ENST00000528142 WBP11Q9Y2W2 641 aaKnown RBP19.78■□□□□ 0.76
VPS28-209ENST00000528142 CROCCQ5TZA2 2017 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 C7orf72A4D263 438 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 C19orf67A6NJJ6 358 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 CAPN5O15484 640 aaPredicted RBP19.77■□□□□ 0.76
VPS28-209ENST00000528142 NDUFS4O43181 175 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 GPR37L1O60883 481 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 CCNDBP1O95273 360 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 KCNK5O95279 499 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 TNFP01375 233 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 HSPA13P48723 471 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 GAB1Q13480 694 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 CPZQ66K79 652 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 PAGE2Q7Z2X7 111 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 EPHX4Q8IUS5 362 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 NETO1Q8TDF5 533 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 GPBAR1Q8TDU6 330 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 ZFP90Q8TF47 636 aa19.77■□□□□ 0.76
VPS28-209ENST00000528142 FAM162AQ96A26 154 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms