RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 SERPINB9P50453 376 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 EFNA3P52797 238 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 IRF9Q00978 393 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 EEF1A2Q05639 463 aaKnown RBP24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 HYAL2Q12891 473 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 ACAP2Q15057 778 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 DEFB134Q4QY38 66 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 MFSD4BQ5TF39 518 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 LRRC70Q7Z2Q7 622 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 KBTBD2Q8IY47 623 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 PNPLA2Q96AD5 504 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 OR1F2PQ96R84 312 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 MFRPQ9BY79 579 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 CLK4Q9HAZ1 481 aaKnown RBP24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 RIC8BQ9NVN3 520 aa24.9■■□□□ 1.58
TSPAN4-217ENST00000527644 NBASA2RRP1 2371 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 A0A087WUV0 522 aaPredicted RBP24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 ZNF860A6NHJ4 632 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 TTLL8A6PVC2 850 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 UBXN8O00124 270 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 CCNT2O60583 730 aaKnown RBP24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 SORBS2O94875 1100 aaKnown RBP24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 KLHL2O95198 593 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 ALDOAP04075 364 aaKnown RBP24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 SMIM10L1P0DMW3 83 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 MLLT10P55197 1068 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 FOXK1P85037 733 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 SLC6A19Q695T7 634 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 TAOK1Q7L7X3 1001 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 SHISA5Q8N114 240 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 ZADH2Q8N4Q0 377 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 OR5T3Q8NGG3 340 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 WDR34Q96EX3 536 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 PTCD3Q96EY7 689 aaKnown RBP24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 SMIM10Q96HG1 83 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 PAFAH2Q99487 392 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 ZNF700Q9H0M5 742 aa24.89■■□□□ 1.58
TSPAN4-217ENST00000527644 HNF4AP41235 474 aa24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 MSH2P43246 934 aa24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 RAB8AP61006 207 aa24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 STXBP1P61764 594 aaKnown RBP24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 XKR6Q5GH73 641 aa24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 KLC3Q6P597 504 aa24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 UBTD2Q8WUN7 234 aa24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 PEX11GQ96HA9 241 aa24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 EFCAB11Q9BUY7 163 aa24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 KLHL31Q9H511 634 aa24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 CLMPQ9H6B4 373 aa24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 SLAMF7Q9NQ25 335 aa24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 C19orf25Q9UFG5 118 aaPredicted RBP24.88■■□□□ 1.57
TSPAN4-217ENST00000527644 CHST10O43529 356 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 PRAMEF4O60810 478 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 B3GALT4O96024 378 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 SERPINA7P05543 415 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 RHOXF2BP0C7M4 288 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 MTHFD2P13995 350 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 LAPTM5Q13571 262 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 DOC2AQ14183 400 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 PCOLCEQ15113 449 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 TBCCQ15814 346 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 IGFBP7Q16270 282 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 TOR1AIP1Q5JTV8 583 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 PRAMEF9Q5VWM5 478 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 IGFL2Q6UWQ7 119 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 ISL2Q96A47 359 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 RHOXF2Q9BQY4 288 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 TUBB6Q9BUF5 446 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 VPS11Q9H270 941 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 ZBTB20Q9HC78 741 aaPredicted RBP24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 ZNF180Q9UJW8 692 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 B3GNT3Q9Y2A9 372 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 ASB1Q9Y576 335 aa24.87■■□□□ 1.57
TSPAN4-217ENST00000527644 ANKDD1BA6NHY2 528 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 K7EPI3 171 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 CLEC3AO75596 197 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 KRT38O76015 456 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 PRR35P0CG20 571 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 ICAM2P13598 275 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 EPORP19235 508 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 CNTFP26441 200 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 HPDP32754 393 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 CASP2P42575 452 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 GLRBP48167 497 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 CD97P48960 835 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 AGTR2P50052 363 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 AP2B1P63010 937 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 IRF8Q02556 426 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 HIST2H2ACQ16777 129 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 PAGE2BQ5JRK9 111 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 HIST2H2AA3Q6FI13 130 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 RIPOR1Q6ZS17 1223 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 CPEB2Q7Z5Q1 589 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 PLPP5Q8NEB5 264 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 UHMK1Q8TAS1 419 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 GAL3ST3Q96A11 431 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 MIB2Q96AX9 1013 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 TBC1D20Q96BZ9 403 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 GPR78Q96P69 363 aa24.86■■□□□ 1.57
TSPAN4-217ENST00000527644 AICDAQ9GZX7 198 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms