RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 HOXB9P17482 250 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-208ENST00000527323 PRKCDQ05655 676 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 UGT8Q16880 541 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 CXorf57Q6NSI4 855 aaKnown RBP12.05□□□□□ -0.48
CAPN1-208ENST00000527323 GATAD2AQ86YP4 633 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 SLC5A8Q8N695 610 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 CSGALNACT1Q8TDX6 532 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 COL21A1Q96P44 957 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 CDK5RAP1Q96SZ6 601 aaKnown RBP12.05□□□□□ -0.48
CAPN1-208ENST00000527323 MTERF1Q99551 399 aaKnown RBP12.05□□□□□ -0.48
CAPN1-208ENST00000527323 EXOSC4Q9NPD3 245 aaKnown RBP12.05□□□□□ -0.48
CAPN1-208ENST00000527323 ERVK13-1Q9NX77 482 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 GBF1Q92538 1859 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 GFRA2O00451 464 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 FZD6O60353 706 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 PTHP01270 115 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 WEE1P30291 646 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 HNF1BP35680 557 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 BMPR1AP36894 532 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 RGS6P49758 472 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 CRISP3P54108 245 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 OR2B6P58173 313 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 MRPS15P82914 257 aaKnown RBP12.05□□□□□ -0.48
CAPN1-208ENST00000527323 CHIT1Q13231 466 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 LYPLAL1Q5VWZ2 237 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 MACC1Q6ZN28 852 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 OR10G2Q8NGC3 310 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 ASIC4Q96FT7 647 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 SIGLEC11Q96RL6 698 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 EPYCQ99645 322 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 HTATIP2Q9BUP3 242 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 FAM8A1Q9UBU6 413 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 CTDSP2O14595 271 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 CYP7B1O75881 506 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 ADORA3P0DMS8 318 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 GABRR2P28476 465 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 OR1E2P47887 323 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 UGT2B15P54855 530 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 CDH12P55289 794 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 SPIBQ01892 262 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 ABRQ12979 859 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 METTL2BQ6P1Q9 378 aaKnown RBP12.05□□□□□ -0.48
CAPN1-208ENST00000527323 CHST9Q7L1S5 443 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 NXPE1Q8N323 547 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 RC3H2Q9HBD1 1191 aaKnown RBP12.05□□□□□ -0.48
CAPN1-208ENST00000527323 TMEM184CQ9NVA4 438 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 ZNF221Q9UK13 617 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 MKLN1Q9UL63 735 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 WBP11Q9Y2W2 641 aaKnown RBP12.05□□□□□ -0.48
CAPN1-208ENST00000527323 NOX1Q9Y5S8 564 aa12.05□□□□□ -0.48
CAPN1-208ENST00000527323 KMOO15229 486 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 KIAA0513O60268 411 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 TRBC1P01850 177 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 SEMG1P04279 462 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 SPAM1P38567 509 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 IRF8Q02556 426 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 ACSM2AQ08AH3 577 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 PPIGQ13427 754 aaKnown RBP eCLIP12.04□□□□□ -0.489e-7■■■□□ 17
CAPN1-208ENST00000527323 BOP1Q14137 746 aaKnown RBP12.04□□□□□ -0.48
CAPN1-208ENST00000527323 FBXO43Q4G163 708 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 C10orf62Q5T681 223 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-208ENST00000527323 C1orf53Q5VUE5 145 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 ACSM2BQ68CK6 577 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 TMC5Q6UXY8 1006 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 GET4Q7L5D6 327 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-208ENST00000527323 RAVER1Q8IY67 606 aaKnown RBP12.04□□□□□ -0.48
CAPN1-208ENST00000527323 TCAIMQ8N3R3 496 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 C7orf34Q96L11 122 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 DUSP26Q9BV47 211 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 RETREG1Q9H6L5 497 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 ZNF556Q9HAH1 456 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 RLIMQ9NVW2 624 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 MS4A12Q9NXJ0 267 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 TAS2R16Q9NYV7 291 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 SH3BP4Q9P0V3 963 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 BTBD3Q9Y2F9 522 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 PCDHB11Q9Y5F2 797 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 A3GALT2U3KPV4 340 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 PATJQ8NI35 1801 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 SSX4O60224 188 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 CKMP06732 381 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 LINC00271P0C7V0 271 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 HMGA1P17096 107 aaKnown RBP12.04□□□□□ -0.48
CAPN1-208ENST00000527323 CCR2P41597 374 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 CRATP43155 626 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 KCNJ10P78508 379 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 CYP27C1Q4G0S4 372 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 LRRC70Q7Z2Q7 622 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 ADGRD2Q7Z7M1 963 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 NLGN4XQ8N0W4 816 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 CYP4Z2PQ8N1L4 340 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 VPS37AQ8NEZ2 397 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 COPS8Q99627 209 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 DOHHQ9BU89 302 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 EMILIN2Q9BXX0 1053 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 DNAJC11Q9NVH1 559 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 CCL26Q9Y258 94 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 LYVE1Q9Y5Y7 322 aa12.04□□□□□ -0.48
CAPN1-208ENST00000527323 ALPK3Q96L96 1907 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 LINC01553A4QN01 128 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms