RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 A8MXE2 369 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 HHLA1C9JL84 531 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 NTN3O00634 580 aaPredicted RBP3.5□□□□□ -1.85
CD44-219ENST00000525685 ATP6V0E1O15342 81 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 SPRY1O43609 319 aaPredicted RBP3.5□□□□□ -1.85
CD44-219ENST00000525685 TRMUO75648 421 aaKnown RBP3.5□□□□□ -1.85
CD44-219ENST00000525685 PLEKHA8P1O95397 391 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 ACSL3O95573 720 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 NGFP01138 241 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 IGHV2-70P01814 119 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 ATP5BP06576 529 aaKnown RBP3.5□□□□□ -1.85
CD44-219ENST00000525685 IRF2P14316 349 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 CYP2B6P20813 491 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 EFNA1P20827 205 aaPredicted RBP3.5□□□□□ -1.85
CD44-219ENST00000525685 ITGA3P26006 1051 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 COPB2P35606 906 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 HERV-K104P61576 105 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 TUBB4BP68371 445 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 CCNA1P78396 465 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 CUL3Q13618 768 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 GRB14Q14449 540 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 PKN2Q16513 984 aaKnown RBP3.5□□□□□ -1.85
CD44-219ENST00000525685 CDC37Q16543 378 aaPredicted RBP3.5□□□□□ -1.85
CD44-219ENST00000525685 PHKG1Q16816 387 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 ITPRIPL2Q3MIP1 535 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 ZNF876PQ49A33 203 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 CYP4A22Q5TCH4 519 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 BLOC1S2Q6QNY1 142 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 PPP1R21Q6ZMI0 780 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 C15orf39Q6ZRI6 1047 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 RBPMS2Q6ZRY4 209 aaKnown RBP3.5□□□□□ -1.85
CD44-219ENST00000525685 NUP54Q7Z3B4 507 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 NIPA2Q8N8Q9 360 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 IQUBQ8NA54 791 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 XXYLT1Q8NBI6 393 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 ZNF248Q8NDW4 579 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 OR11H4Q8NGC9 324 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 KIF18AQ8NI77 898 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 GRHL3Q8TE85 626 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 CHURC1Q8WUH1 139 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 PHLDA1Q8WV24 401 aaPredicted RBP3.5□□□□□ -1.85
CD44-219ENST00000525685 ARSGQ96EG1 525 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 SPATA17Q96L03 361 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 F2RL3Q96RI0 385 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 SERINC2Q96SA4 455 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 RAD9AQ99638 391 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 LAT2Q9GZY6 243 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 ARRDC1-AS1Q9H2J1 176 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 CDH20Q9HBT6 801 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 RAVER2Q9HCJ3 691 aaKnown RBP3.5□□□□□ -1.85
CD44-219ENST00000525685 XAB2Q9HCS7 855 aaKnown RBP3.5□□□□□ -1.85
CD44-219ENST00000525685 SIX2Q9NPC8 291 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 FGF21Q9NSA1 209 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 HOXC10Q9NYD6 342 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 MAD2L2Q9UI95 211 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 KLF18A0A0U1RQI7 1052 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 TMEM221A6NGB7 291 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 SLC15A5A6NIM6 579 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 ENO4A6NNW6 628 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 H7C0S8 307 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 EPHB6O15197 1021 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 CYTH3O43739 400 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 OR10H2O60403 315 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 RPS6KA5O75582 802 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 SLC25A27O95847 323 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 PENKP01210 267 aaPredicted RBP3.49□□□□□ -1.85
CD44-219ENST00000525685 PGK2P07205 417 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 PRSS56P0CW18 603 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 SAGP10523 405 aaPredicted RBP3.49□□□□□ -1.85
CD44-219ENST00000525685 HAPLN1P10915 354 aaPredicted RBP3.49□□□□□ -1.85
CD44-219ENST00000525685 CASTP20810 708 aaKnown RBP3.49□□□□□ -1.85
CD44-219ENST00000525685 CA4P22748 312 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 CA6P23280 308 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 MPZP25189 248 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 PSMA5P28066 241 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 HOXD10P28358 340 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 CSTF2P33240 577 aaKnown RBP eCLIP3.49□□□□□ -1.85
CD44-219ENST00000525685 TIMP3P35625 211 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 LHX1P48742 406 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 RAD23AP54725 363 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 HNRNPKP61978 463 aaKnown RBP eCLIP3.49□□□□□ -1.85
CD44-219ENST00000525685 KLC1Q07866 573 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 ZNF415Q09FC8 603 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 GPR17Q13304 367 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 CCL14Q16627 93 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 UGP2Q16851 508 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 QRICH1Q2TAL8 776 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 FFAR4Q5NUL3 377 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 PRR27Q6MZM9 219 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 SHQ1Q6PI26 577 aaKnown RBP3.49□□□□□ -1.85
CD44-219ENST00000525685 RUFY3Q7L099 469 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 SLC16A9Q7RTY1 509 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 SLFN11Q7Z7L1 901 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 TLK2Q86UE8 772 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 NDUFAF2Q8N183 169 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 OR13C3Q8NGS6 347 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 CTCFLQ8NI51 663 aaPredicted RBP3.49□□□□□ -1.85
CD44-219ENST00000525685 SETD6Q8TBK2 473 aa3.49□□□□□ -1.85
CD44-219ENST00000525685 RAET1EQ8TD07 263 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms