RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SLC2A2P11168 524 aaPredicted RBP13.36□□□□□ -0.27
SYNPO-205ENST00000522122 IGFBP4P22692 258 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 GRK6P43250 576 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 ATAT1Q5SQI0 421 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 TAF8Q7Z7C8 310 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 CHCHD4Q8N4Q1 142 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF366Q8N895 744 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 MAGIXQ9H6Y5 334 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 RMI1Q9H9A7 625 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 DDX6P26196 483 aaKnown RBP eCLIP13.36□□□□□ -0.27
SYNPO-205ENST00000522122 CLCNKAP51800 687 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 Q6ZVL8 140 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 MARCH9Q86YJ5 346 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 HERVK_113Q902F9 699 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 ARMC5Q96C12 935 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 BCL7BQ9BQE9 202 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 TTYH1Q9H313 450 aaPredicted RBP13.36□□□□□ -0.27
SYNPO-205ENST00000522122 WDR26Q9H7D7 661 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 HEBP2Q9Y5Z4 205 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 GRXCR2A6NFK2 248 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 TLX2O43763 284 aaPredicted RBP13.36□□□□□ -0.27
SYNPO-205ENST00000522122 C6orf47O95873 294 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 BCKDHAP12694 445 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 VMACQ2NL98 169 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 MINDY4Q4G0A6 757 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 KDELC1Q6UW63 502 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF598Q86UK7 904 aaKnown RBP13.36□□□□□ -0.27
SYNPO-205ENST00000522122 LRRTM4Q86VH4 590 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 OR4K1Q8NGD4 311 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 PTERQ96BW5 349 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 RNF31Q96EP0 1072 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 TBX5Q99593 518 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 MND1Q9BWT6 205 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 DPEP2Q9H4A9 486 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 RETREG1Q9H6L5 497 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 DLGAP4Q9Y2H0 992 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 FOXD2O60548 495 aaPredicted RBP13.35□□□□□ -0.27
SYNPO-205ENST00000522122 DCKP27707 260 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 OXTRP30559 389 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 CSTF1Q05048 431 aaKnown RBP13.35□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF763Q0D2J5 394 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 AKIRIN2Q53H80 203 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 PLEKHS1Q5SXH7 462 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 HDDC3Q8N4P3 179 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 CDK5RAP2Q96SN8 1893 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 GKP32189 559 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 KDELR2P33947 212 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 ADRA1AP35348 466 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 IGFALSP35858 605 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 CD97P48960 835 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 KCNC3Q14003 757 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 HSF5Q4G112 596 aaPredicted RBP13.35□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF789Q5FWF6 425 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 GPR150Q8NGU9 434 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 SLC5A11Q8WWX8 675 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 SLC22A18Q96BI1 424 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 PIGUQ9H490 435 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 TNFRSF10DQ9UBN6 386 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 PFDN2Q9UHV9 154 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 SERPINA3P01011 423 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 ACSL1P33121 698 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 ALDH3B2P48448 385 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 DCDC1P59894 354 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 KCNC4Q03721 635 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 ANKRD26P1Q6NSI1 321 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 PSAPL1Q6NUJ1 521 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 MMAAQ8IVH4 418 aaKnown RBP13.35□□□□□ -0.27
SYNPO-205ENST00000522122 SLC15A4Q8N697 577 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 CAPNS2Q96L46 248 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 PCDHGB7Q9Y5F8 929 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 FUOMA2VDF0 154 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 COCHO43405 550 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 TSPAN9O75954 239 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 GJB5O95377 273 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 RPS3AP61247 264 aaKnown RBP13.35□□□□□ -0.27
SYNPO-205ENST00000522122 CBLBQ13191 982 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 WSCD2Q2TBF2 565 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 SNAP47Q5SQN1 464 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 REEP3Q6NUK4 255 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 KRTCAP2Q8N6L1 136 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 OVCA2Q8WZ82 227 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 SLC30A3Q99726 388 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 LHPPQ9H008 270 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 MMP27Q9H306 513 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 TCF7L1Q9HCS4 588 aa13.35□□□□□ -0.27
SYNPO-205ENST00000522122 PPIEQ9UNP9 301 aaKnown RBP13.35□□□□□ -0.27
SYNPO-205ENST00000522122 SOX14O95416 240 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 CHRNA1P02708 482 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 HLA-DPB1P04440 258 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 GIMD1P0DJR0 217 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ALAS2P22557 587 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 PITPNAQ00169 270 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 TLE2Q04725 743 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 RAB41Q5JT25 222 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 MAMDC4Q6UXC1 1216 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ALKAL1Q6UXT8 129 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF783Q6ZMS7 281 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 SCML4Q8N228 414 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 FAM46DQ8NEK8 389 aa13.34□□□□□ -0.27
SYNPO-205ENST00000522122 OR52B6Q8NGF0 335 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms