RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 ERICH5Q6P6B1 374 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 ABRAXAS1Q6UWZ7 409 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 RD3Q7Z3Z2 195 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 ADCK2Q7Z695 626 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 MFSD2AQ8NA29 543 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 OR4A15Q8NGL6 344 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 SLC47A1Q96FL8 570 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 GUCD1Q96NT3 240 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 F2RL3Q96RI0 385 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 AASDHPPTQ9NRN7 309 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 OLAHQ9NV23 265 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 SPASTQ9UBP0 616 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 EBF1Q9UH73 591 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 NDRG2Q9UN36 371 aaKnown RBP17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 VPS4AQ9UN37 437 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 GMEB1Q9Y692 573 aa17.68■□□□□ 0.42
TRAPPC9-210ENST00000521667 IGKV1-8A0A0C4DH67 115 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 DEAF1O75398 565 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 PRKD3O94806 890 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 KCNK5O95279 499 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 RASAL1O95294 804 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 SEMA4FO95754 770 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 SERPINA1P01009 418 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 IL3P08700 152 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 NKG7Q16617 165 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 CCNYL2Q5T2Q4 361 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 CPZQ66K79 652 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 WASH2PQ6VEQ5 465 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 ZZZ3Q8IYH5 903 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 FLCNQ8NFG4 579 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 HLA-CQ95604 372 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 TSACCQ96A04 125 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 VPS50Q96JG6 964 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 ZNF717Q9BY31 904 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 KIR3DX1Q9H7L2 352 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 USP36Q9P275 1121 aaKnown RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 ZNF282Q9UDV7 671 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 CORO2BQ9UQ03 480 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 DPPA5A6NC42 116 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 TNFRSF10CO14798 259 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 CCNDBP1O95273 360 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 IL1RNP18510 177 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 AK4P27144 223 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 YPEL5P62699 121 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 GAB1Q13480 694 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 VMACQ2NL98 169 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 PAGE2Q7Z2X7 111 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 CHERPQ8IWX8 916 aaKnown RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 PGBD3Q8N328 593 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 GOT1L1Q8NHS2 421 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 PNPT1Q8TCS8 783 aaKnown RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 ZFP90Q8TF47 636 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 MAGIXQ9H6Y5 334 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 POLMQ9NP87 494 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 MRPS30Q9NP92 439 aaKnown RBP17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 PDP2Q9P2J9 529 aa17.67■□□□□ 0.42
TRAPPC9-210ENST00000521667 PRICKLE3O43900 615 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 LCMT2O60294 686 aaKnown RBP17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 GPR37L1O60883 481 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 PRSS23O95084 383 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 EML2O95834 649 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 HOXB6P17509 224 aaKnown RBP17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 BSGP35613 385 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 ABATP80404 500 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 NHSL2Q5HYW2 709 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 Q6ZS52 159 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 QRFPRQ96P65 431 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 SPATA9Q9BWV2 254 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 NTN4Q9HB63 628 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 SLC2A4RGQ9NR83 387 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 ZNF639Q9UID6 485 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 PCDHGB4Q9UN71 923 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 WBP11Q9Y2W2 641 aaKnown RBP17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 CROCCQ5TZA2 2017 aa17.66■□□□□ 0.42
TRAPPC9-210ENST00000521667 TRBC2A0A5B9 178 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 C10orf142B7Z368 130 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 RTCAO00442 366 aaKnown RBP17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 CAPN5O15484 640 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 NDUFS4O43181 175 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 SRFP11831 508 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 ZNF23P17027 643 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 NDUFS1P28331 727 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 MAPK12P53778 367 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 TXNL4AP83876 142 aaKnown RBP17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 GK3PQ14409 553 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 SMAD2Q15796 467 aaKnown RBP17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 MPEG1Q2M385 716 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 OR52E8Q6IFG1 317 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 PTOV1Q86YD1 416 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 PLD3Q8IV08 490 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 EID3Q8N140 333 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 TTLQ8NG68 377 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 CIDECQ96AQ7 238 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 MIEF1Q9NQG6 463 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 PCOLCE2Q9UKZ9 415 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 HS3ST3A1Q9Y663 406 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 EI24O14681 340 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 CLEC3AO75596 197 aa17.65■□□□□ 0.42
TRAPPC9-210ENST00000521667 C6orf47O95873 294 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms