RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 GPR65Q8IYL9 337 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 MFSD2AQ8NA29 543 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 TEX12Q9BXU0 123 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 RC3H2Q9HBD1 1191 aaKnown RBP9.76□□□□□ -0.85
MCF2-209ENST00000520602 DKK3Q9UBP4 350 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 UTS2RQ9UKP6 389 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 PPT2Q9UMR5 302 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 GRXCR2A6NFK2 248 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 GFYI3L273 518 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 TOR1BO14657 336 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 RGS10O43665 173 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 PIM1P11309 404 aaPredicted RBP9.76□□□□□ -0.85
MCF2-209ENST00000520602 NUDT6P53370 316 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 CDC42P60953 191 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 DSTNP60981 165 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 BNIP3Q12983 259 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 ITGADQ13349 1161 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 C6orf141Q5SZD1 244 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 NUDT13Q86X67 352 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 EPHX4Q8IUS5 362 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 OR10G2Q8NGC3 310 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 COL21A1Q96P44 957 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 ZNF607Q96SK3 696 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 MACROD1Q9BQ69 325 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 GORASP2Q9H8Y8 452 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 TM7SF3Q9NS93 570 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 TAS2R9Q9NYW1 312 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 EBF1Q9UH73 591 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 ZNF229Q9UJW7 825 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 H0YAE9 185 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 NRG2O14511 850 aaPredicted RBP9.76□□□□□ -0.85
MCF2-209ENST00000520602 GADD45GO95257 159 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 CTSEP14091 401 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 HOXB2P14652 356 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 HOXB6P17509 224 aaKnown RBP9.76□□□□□ -0.85
MCF2-209ENST00000520602 TNNI3P19429 210 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 PSMB5P28074 263 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 CDK9P50750 372 aaKnown RBP9.76□□□□□ -0.85
MCF2-209ENST00000520602 RAB39AQ14964 217 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 MAPK11Q15759 364 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 UGT8Q16880 541 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 SLC36A3Q495N2 470 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 ZNF776Q68DI1 518 aaPredicted RBP9.76□□□□□ -0.85
MCF2-209ENST00000520602 XKR5Q6UX68 686 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 ZNF551Q7Z340 670 aaPredicted RBP9.76□□□□□ -0.85
MCF2-209ENST00000520602 LGI4Q8N135 537 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 CRIPAKQ8N1N5 446 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 ZBED6CLQ96FA7 236 aaPredicted RBP9.76□□□□□ -0.85
MCF2-209ENST00000520602 PCBD2Q9H0N5 130 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 TM9SF3Q9HD45 589 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 KLHL20Q9Y2M5 609 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 TRBC2A0A5B9 178 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 OR52A4PA6NMU1 304 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 AGRPO00253 132 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 RGS5O15539 181 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 LILRB3O75022 631 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 CYP7B1O75881 506 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 RETP07949 1114 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 GJA4P35212 333 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 SLC16A1P53985 500 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 SFSWAPQ12872 951 aaKnown RBP9.75□□□□□ -0.85
MCF2-209ENST00000520602 PMS2P3Q13401 168 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 NPTX1Q15818 432 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 C16orf62Q7Z3J2 963 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 ADGRD2Q7Z7M1 963 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 METTL25Q8N6Q8 603 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 PLA2G15Q8NCC3 412 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 C16orf78Q8WTQ4 265 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 RGMAQ96B86 450 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 CPPED1Q9BRF8 314 aaPredicted RBP9.75□□□□□ -0.85
MCF2-209ENST00000520602 FNDC11Q9BVV2 318 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 C6orf62Q9GZU0 229 aaPredicted RBP9.75□□□□□ -0.85
MCF2-209ENST00000520602 SEMA3GQ9NS98 782 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 KLHL28Q9NXS3 571 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 SPACA6W5XKT8 324 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 PSMD11O00231 422 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 NDUFS4O43181 175 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 UGDHO60701 494 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 ARHGEF15O94989 841 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 SMIM18P0DKX4 95 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 S100A5P33763 92 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 PTGER1P34995 402 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 P2RY2P41231 377 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 NCBP2P52298 156 aaKnown RBP eCLIP9.75□□□□□ -0.85
MCF2-209ENST00000520602 TAP2Q03519 686 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 CD47Q08722 323 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 UAP1L1Q3KQV9 507 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 ARTNQ5T4W7 220 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 ANKRD34AQ69YU3 496 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 PTCHD4Q6ZW05 846 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 ERI1Q8IV48 349 aaKnown RBP9.75□□□□□ -0.85
MCF2-209ENST00000520602 FAM217AQ8IXS0 508 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 OXR1Q8N573 874 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 B4GALNT2Q8NHY0 566 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 RAB7BQ96AH8 199 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 NACC2Q96BF6 587 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 TESCQ96BS2 214 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 ISOC1Q96CN7 298 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 CHFRQ96EP1 664 aa9.75□□□□□ -0.85
MCF2-209ENST00000520602 CRISPLD2Q9H0B8 497 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms