RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 MTFR2Q6P444 385 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 TRMT10BQ6PF06 316 aaKnown RBP14.26□□□□□ -0.13
CSMD1-207ENST00000520451 ABHD13Q7L211 337 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 MRGPRGQ86SM5 289 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 PDIK1LQ8N165 341 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 NT5CQ8TCD5 201 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 FAM45AQ8TCE6 357 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 SLC5A11Q8WWX8 675 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 SLCO2A1Q92959 643 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 NEIL2Q969S2 332 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 OLFM1Q99784 485 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 SPNS1Q9H2V7 528 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 ZFP69BQ9UJL9 534 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 CHMP2BQ9UQN3 213 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 SLC19A2O60779 497 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 B4GALT2O60909 372 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 CD46P15529 392 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 GRNP28799 593 aaKnown RBP14.25□□□□□ -0.13
CSMD1-207ENST00000520451 EEF1DP29692 281 aaKnown RBP14.25□□□□□ -0.13
CSMD1-207ENST00000520451 SCTRP47872 440 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 SPINK14Q6IE38 97 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 NIPAL1Q6NVV3 410 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 RPTNQ6XPR3 784 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 STRA8Q7Z7C7 330 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 CYP4X1Q8N118 509 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 ZNF808Q8N4W9 903 aaPredicted RBP14.25□□□□□ -0.13
CSMD1-207ENST00000520451 HORMAD2Q8N7B1 307 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 TMEM178AQ8NBL3 297 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 SCMH1Q96GD3 660 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 MAGED4Q96JG8 741 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 PWWP2AQ96N64 755 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 TSPAN10Q9H1Z9 355 aaPredicted RBP14.25□□□□□ -0.13
CSMD1-207ENST00000520451 IKZF3Q9UKT9 509 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 DYRK1BQ9Y463 629 aa14.25□□□□□ -0.13
CSMD1-207ENST00000520451 KLF2Q9Y5W3 355 aaPredicted RBP14.25□□□□□ -0.13
CSMD1-207ENST00000520451 NDC80O14777 642 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 ZSCAN12O43309 604 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 MLYCDO95822 493 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 SAT1P21673 171 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 IVDP26440 423 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 AHRP35869 848 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 HNF4AP41235 474 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 REEP5Q00765 189 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 ALDH6A1Q02252 535 aaKnown RBP14.24□□□□□ -0.13
CSMD1-207ENST00000520451 MORF4L2Q15014 288 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 C3AR1Q16581 482 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 STEAP4Q687X5 459 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 SBSNQ6UWP8 590 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 BNC2Q6ZN30 1099 aaPredicted RBP14.24□□□□□ -0.13
CSMD1-207ENST00000520451 TMPRSS11BQ86T26 416 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 THOC6Q86W42 341 aaKnown RBP14.24□□□□□ -0.13
CSMD1-207ENST00000520451 MCEMP1Q8IX19 187 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 LGI4Q8N135 537 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 KIF2BQ8N4N8 673 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 UTP15Q8TED0 518 aaKnown RBP14.24□□□□□ -0.13
CSMD1-207ENST00000520451 GPR137Q96N19 417 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 FRMD6Q96NE9 622 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 PTCHD1Q96NR3 888 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 WDR83Q9BRX9 315 aaKnown RBP14.24□□□□□ -0.13
CSMD1-207ENST00000520451 CDCP1Q9H5V8 836 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 RUBCNLQ9H714 662 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 PELI2Q9HAT8 420 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 TINAGQ9UJW2 476 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 APCP25054 2843 aa14.24□□□□□ -0.13
CSMD1-207ENST00000520451 CTAGE15A4D2H0 777 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 ASPDHA6ND91 283 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 NPEPPSL1A6NEC2 478 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 URADA6NGE7 173 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 NPIPA5E9PKD4 350 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 PRMT3O60678 531 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 SP1P08047 785 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 ESRRAP11474 423 aaPredicted RBP14.23□□□□□ -0.13
CSMD1-207ENST00000520451 ZNF37AP17032 561 aaPredicted RBP14.23□□□□□ -0.13
CSMD1-207ENST00000520451 HTR1EP28566 365 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 RAB8AP61006 207 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 BTG2P78543 158 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 RBBP5Q15291 538 aaKnown RBP14.23□□□□□ -0.13
CSMD1-207ENST00000520451 PPP1R3AQ16821 1122 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 QSOX2Q6ZRP7 698 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 GALNTL5Q7Z4T8 443 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 CTAGE6Q86UF2 777 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 RPS19BP1Q86WX3 136 aaKnown RBP14.23□□□□□ -0.13
CSMD1-207ENST00000520451 KLHL7Q8IXQ5 586 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 ANKRD53Q8N9V6 530 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 FAM98AQ8NCA5 519 aaKnown RBP14.23□□□□□ -0.13
CSMD1-207ENST00000520451 TRPV3Q8NET8 790 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 ELP5Q8TE02 316 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 THAP3Q8WTV1 239 aaPredicted RBP14.23□□□□□ -0.13
CSMD1-207ENST00000520451 PDLIM5Q96HC4 596 aaKnown RBP14.23□□□□□ -0.13
CSMD1-207ENST00000520451 AIF1LQ9BQI0 150 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 RHBGQ9H310 441 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 TRMT1Q9NXH9 659 aaKnown RBP14.23□□□□□ -0.13
CSMD1-207ENST00000520451 ZFATQ9P243 1243 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 LRFN1Q9P244 771 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 NPIPA1Q9UND3 350 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 PSAT1Q9Y617 370 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 TEX264Q9Y6I9 313 aa14.23□□□□□ -0.13
CSMD1-207ENST00000520451 SAGE2PA6NJ88 616 aa14.22□□□□□ -0.13
CSMD1-207ENST00000520451 PSMD12O00232 456 aaPredicted RBP14.22□□□□□ -0.13
CSMD1-207ENST00000520451 CDC7O00311 574 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms