RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 B3GALT2O43825 422 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 ALX3O95076 343 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 ZDHHC11BP0C7U3 371 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 NR2C1P13056 603 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 HERV-K104P61576 105 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 HEPACAMQ14CZ8 416 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 UBAP2Q5T6F2 1119 aaKnown RBP11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 OR52J3Q8NH60 311 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 SH3RF2Q8TEC5 729 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 TWNKQ96RR1 684 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 MINDY3Q9H8M7 445 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 CERS4Q9HA82 394 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 SCPEP1Q9HB40 452 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 LYARQ9NX58 379 aaKnown RBP11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 ZNF226Q9NYT6 803 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 GHRLQ9UBU3 117 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 HS3ST4Q9Y661 456 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 AP1M2Q9Y6Q5 423 aa11.75□□□□□ -0.53
ERGIC1-208ENST00000520399 NFKBIEO00221 500 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 DFNA5O60443 496 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 KCNE1P15382 129 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 DNAJA1P31689 397 aaKnown RBP11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 FOXN2P32314 431 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 NR4A2P43354 598 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 RORCP51449 518 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 GBX2P52951 348 aaPredicted RBP11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 FADDQ13158 208 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 GPR33Q49SQ1 333 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 KLHL22Q53GT1 634 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SFT2D3Q587I9 215 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 METTL2BQ6P1Q9 378 aaKnown RBP11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 CCBE1Q6UXH8 406 aaPredicted RBP11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 GDPD4Q6W3E5 623 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 BPHLQ86WA6 291 aaPredicted RBP11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 NPLOC4Q8TAT6 608 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 OR2AG1Q9H205 316 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SMOC2Q9H3U7 446 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SRMSQ9H3Y6 488 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 C8orf33Q9H7E9 229 aaPredicted RBP11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 ZDHHC3Q9NYG2 299 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 YIPF1Q9Y548 306 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 UNCXA6NJT0 531 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 hCG_2039718K7EN88 272 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 AQP9O43315 295 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 PRAMEF12O95522 483 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 ZNF182P17025 639 aaPredicted RBP11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SLC3A1Q07837 685 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 GALNT1Q10472 559 aaPredicted RBP11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 IFI44LQ53G44 452 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 IDO2Q6ZQW0 420 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 PAQR7Q86WK9 346 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 HERVK_113Q902F9 699 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 LIN37Q96GY3 246 aaPredicted RBP11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SCLYQ96I15 445 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 OR5B12Q96R08 314 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 C11orf84Q9BUA3 381 aaPredicted RBP11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 PPP1R14DQ9NXH3 145 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 TBX18O95935 607 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 CSN2P05814 226 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 CDH12P55289 794 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 MINDY4Q4G0A6 757 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 IGSF11Q5DX21 431 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 TMEM145Q8NBT3 493 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 ZMIZ2Q8NF64 920 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 ZCCHC10Q8TBK6 192 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SLC35F5Q8WV83 523 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 IFT27Q9BW83 186 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 TBC1D17Q9HA65 648 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 OR51F1A6NGY5 319 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SSX4O60224 188 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 CREB1P16220 341 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SELENOVP59797 346 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SCGB2B2Q4G0G5 96 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 LRRC73Q5JTD7 316 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 CNKSR3Q6P9H4 555 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 Q6ZNX1 250 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SLC16A9Q7RTY1 509 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 GATA6Q92908 595 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SMARCD2Q92925 531 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 SUV39H2Q9H5I1 410 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 LRP6O75581 1613 aa11.74□□□□□ -0.53
ERGIC1-208ENST00000520399 A0A1W2PRQ8 180 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 CDKN2CP42773 168 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 RAB4BP61018 213 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 CREB5Q02930 508 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 PAFAH1B3Q15102 231 aaKnown RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 FAM174BQ3ZCQ3 159 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 FBXL22Q6P050 247 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 DNM1P34Q6PK57 102 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 NOXA1Q86UR1 476 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 FOXRED2Q8IWF2 684 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 ACDQ96AP0 544 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 PTPN18Q99952 460 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 C11orf49Q9H6J7 331 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 MKKSQ9NPJ1 570 aaPredicted RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 GNG13Q9P2W3 67 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 TESMINQ9Y4I5 508 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 TTC24A2A3L6 582 aaPredicted RBP11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 IFNA10P01566 189 aa11.73□□□□□ -0.53
ERGIC1-208ENST00000520399 RAP2AP10114 183 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms