RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 RAB3IL1Q8TBN0 382 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 METTL21AQ8WXB1 218 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 MRPL24Q96A35 216 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 NTNG2Q96CW9 530 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 SPATA32Q96LK8 384 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 TIMP4Q99727 224 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 CCM2Q9BSQ5 444 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 CRACR2AQ9BSW2 395 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 MED18Q9BUE0 208 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 BHLHE41Q9C0J9 482 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 POLR1EQ9GZS1 481 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 LDAHQ9H6V9 325 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 C12orf49Q9H741 205 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 LIN28AQ9H9Z2 209 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 IL1RL2Q9HB29 575 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 NLRC4Q9NPP4 1024 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 ESM1Q9NQ30 184 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 MED29Q9NX70 200 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 ARL15Q9NXU5 204 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 OR6C2Q9NZP2 312 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 ZNF223Q9UK11 482 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 SH2B3Q9UQQ2 575 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 RUVBL1Q9Y265 456 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 CSMD3Q7Z407 3707 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 TCRBV5S1A1TA0A578 114 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 PABPN1LA6NDY0 278 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 A6NHS1 94 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 CD8B2A6NJW9 211 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 AHRRA9YTQ3 701 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 BUD23O43709 281 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 SRPX2O60687 465 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 ZNF354AO60765 605 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 OR6B1O95007 311 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 TGFAP01135 160 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 COL6A2P12110 1019 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 GPD1P21695 349 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 PSMB5P28074 263 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 ACADLP28330 430 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 PKLRP30613 574 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 CPOXP36551 454 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 GZMKP49863 264 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 GP2P55259 537 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 TAS2R50P59544 299 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 LDLRAP1Q5SW96 308 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 NDUFAF5Q5TEU4 345 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 FDX2Q6P4F2 183 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 LRRC8BQ6P9F7 803 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 BEND4Q6ZU67 534 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 RNF44Q7L0R7 432 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 NOP9Q86U38 636 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 NT5DC3Q86UY8 548 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 SLC30A5Q8TAD4 765 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 HM13Q8TCT9 377 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 TMX3Q96JJ7 454 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 CABS1Q96KC9 395 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 CCDC138Q96M89 665 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 TRIB1Q96RU8 372 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 DHX35Q9H5Z1 703 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 MAGEE1Q9HCI5 957 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 SIX2Q9NPC8 291 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 ZNF226Q9NYT6 803 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 PDP1Q9P0J1 537 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 AP4E1Q9UPM8 1137 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 PCDHA3Q9Y5H8 950 aa6.17□□□□□ -1.42
CTNNA1-216ENST00000519489 DNAH7Q8WXX0 4024 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 FRG2CA6NGY1 282 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 LRRC3CA6NJW4 275 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 H0YGG7 62 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 CDC7O00311 574 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 P2RX6O15547 441 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 PAX4O43316 350 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 PRPSAP2O60256 369 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 ERN1O75460 977 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 TNFRSF21O75509 655 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 TNFSF13O75888 250 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 MMEP08473 750 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 USF1P22415 310 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 FMO4P31512 558 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 HTR7P34969 479 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 UGT2B10P36537 528 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 SRP14P37108 136 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 CD86P42081 329 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 CD151P48509 253 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 STX17P56962 302 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 HILS1P60008 231 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 ARF3P61204 181 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 RPL7AP62424 266 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 IRX1P78414 480 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 FKBP3Q00688 224 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 KIF5AQ12840 1032 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 BECN1Q14457 450 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 STK38Q15208 465 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 LONRF2Q1L5Z9 754 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 P3H1Q32P28 736 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 CCDC40Q4G0X9 1142 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 DPY19L2P1Q6NXN4 242 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 TRIM65Q6PJ69 517 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 VN1R5Q7Z5H4 357 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 SLC26A11Q86WA9 606 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms