RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 HPDP32754 393 aaPredicted RBP20.83■□□□□ 0.93
VEGFA-217ENST00000518538 CRHR1P34998 444 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 HNF4AP41235 474 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 CCT5P48643 541 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 KLC1Q07866 573 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 DEFB134Q4QY38 66 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 VWA2Q5GFL6 755 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 SHISA6Q6ZSJ9 500 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 MRGPREQ86SM8 312 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 GAL3ST3Q96A11 431 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 C1QTNF3Q9BXJ4 246 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 AICDAQ9GZX7 198 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 KLHL31Q9H511 634 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 SEMA3GQ9NS98 782 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 RALYQ9UKM9 306 aaKnown RBP20.83■□□□□ 0.93
VEGFA-217ENST00000518538 MGAQ8IWI9 3026 aa20.83■□□□□ 0.93
VEGFA-217ENST00000518538 LRIT2A6NDA9 550 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 DLX3O60479 287 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 RDH16O75452 317 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 IGHEP01854 428 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 SMIM10L1P0DMW3 83 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 MMP11P24347 488 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 ATP5F1P24539 256 aaPredicted RBP20.82■□□□□ 0.92
VEGFA-217ENST00000518538 SERPINB1P30740 379 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 HNRNPH1P31943 449 aaKnown RBP20.82■□□□□ 0.92
VEGFA-217ENST00000518538 POLE2P56282 527 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 HERVK_113P63132 956 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 SLC18A2Q05940 514 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 ADNP2Q6IQ32 1131 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 PPP1R32Q7Z5V6 425 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 MYLK4Q86YV6 388 aaPredicted RBP20.82■□□□□ 0.92
VEGFA-217ENST00000518538 APLFQ8IW19 511 aaPredicted RBP20.82■□□□□ 0.92
VEGFA-217ENST00000518538 ZC3H7AQ8IWR0 971 aaKnown RBP20.82■□□□□ 0.92
VEGFA-217ENST00000518538 PRSS58Q8IYP2 241 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 L3MBTL4Q8NA19 623 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 OR7G3Q8NG95 312 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 OR51Q1Q8NH59 317 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 MS4A6EQ96DS6 147 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 SMIM10Q96HG1 83 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 NSUN5Q96P11 429 aaKnown RBP20.82■□□□□ 0.92
VEGFA-217ENST00000518538 CRB3Q9BUF7 120 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 ERVK-6Q9BXR3 956 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 NOL11Q9H8H0 719 aaKnown RBP20.82■□□□□ 0.92
VEGFA-217ENST00000518538 ZBTB26Q9HCK0 441 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 HCN3Q9P1Z3 774 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 EMCNQ9ULC0 261 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 GRID1Q9ULK0 1009 aa20.82■□□□□ 0.92
VEGFA-217ENST00000518538 ZNF860A6NHJ4 632 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 COPEO14579 308 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 OR7A17O14581 309 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 TBX6O95947 436 aaPredicted RBP20.81■□□□□ 0.92
VEGFA-217ENST00000518538 RAB8AP61006 207 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 ATP1A4Q13733 1029 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 ADPRMQ3LIE5 342 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 CCDC153Q494R4 210 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 TRABD2AQ86V40 505 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 SLC22A9Q8IVM8 553 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 C4orf33Q8N1A6 199 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 ZNF483Q8TF39 744 aaPredicted RBP20.81■□□□□ 0.92
VEGFA-217ENST00000518538 ZNF473Q8WTR7 871 aaKnown RBP20.81■□□□□ 0.92
VEGFA-217ENST00000518538 ATP6V1E2Q96A05 226 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 BBC3Q96PG8 261 aaPredicted RBP20.81■□□□□ 0.92
VEGFA-217ENST00000518538 NTMT1Q9BV86 223 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 CLK4Q9HAZ1 481 aaKnown RBP20.81■□□□□ 0.92
VEGFA-217ENST00000518538 ADGRE2Q9UHX3 823 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 C3orf18Q9UK00 162 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 TSC22D4Q9Y3Q8 395 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 PCDHGA11Q9Y5H2 935 aa20.81■□□□□ 0.92
VEGFA-217ENST00000518538 C4orf51C9J302 202 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 H0YIV9 168 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 PEX12O00623 359 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 BMP10O95393 424 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 CLDN9O95484 217 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 B3GALT4O96024 378 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 PROCP04070 461 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 FAM87AP0C7U9 286 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 PCNAP12004 261 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 XCR1P46094 333 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 CCNG1P51959 295 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 PRKAA2P54646 552 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 MED25Q71SY5 747 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 LAPTM4BQ86VI4 370 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 TMEM102Q8N9M5 508 aaPredicted RBP20.8■□□□□ 0.92
VEGFA-217ENST00000518538 OR2L5Q8NG80 312 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 OR52B6Q8NGF0 335 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 REPS1Q96D71 796 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 REXO4Q9GZR2 422 aaKnown RBP20.8■□□□□ 0.92
VEGFA-217ENST00000518538 ADNPQ9H2P0 1102 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 SEMA4BQ9NPR2 832 aaPredicted RBP20.8■□□□□ 0.92
VEGFA-217ENST00000518538 MKS1Q9NXB0 559 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 P4HTMQ9NXG6 502 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 RNF11Q9Y3C5 154 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 HS3ST3B1Q9Y662 390 aa20.8■□□□□ 0.92
VEGFA-217ENST00000518538 NBEAQ8NFP9 2946 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 CCDC88CQ9P219 2028 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 ARGFXA6NJG6 315 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 IDSB3KWA1 339 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 ERI3O43414 337 aaKnown RBP20.79■□□□□ 0.92
VEGFA-217ENST00000518538 PLIN3O60664 434 aa20.79■□□□□ 0.92
VEGFA-217ENST00000518538 ERLIN1O75477 346 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms