RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 PCDHGA6Q9Y5G7 932 aa5.57□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PCDHGA3Q9Y5H0 932 aa5.57□□□□□ -1.52
SCARNA6.1-201ENST00000516989 X6R8D5 127 aa5.57□□□□□ -1.52
SCARNA6.1-201ENST00000516989 WDR87Q6ZQQ6 2873 aa5.57□□□□□ -1.52
SCARNA6.1-201ENST00000516989 MN1Q10571 1320 aaPredicted RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 A0A0J9YVX5 310 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 A0A0J9YY10 115 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PMS2P1A4D2B8 440 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SYCE1LA8MT33 242 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 B4E171 279 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 UBXN8O00124 270 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SCDO00767 359 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CTIFO43310 598 aaKnown RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PRICKLE3O43900 615 aaPredicted RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 KERAO60938 352 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CCNDBP1O95273 360 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 IGLV1-40P01703 118 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ANKRD34CP0C6C1 535 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 EBLN1P0CF75 366 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ERGP11308 486 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FGF3P11487 239 aaPredicted RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 GFAPP14136 432 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FOLR1P15328 257 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 NELFEP18615 380 aaKnown RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 MAGP20916 626 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PSMB5P28074 263 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TSPAN7P41732 249 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 GDF5P43026 501 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 MAGEA12P43365 314 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CCT5P48643 541 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 HNMTP50135 292 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CSRP3P50461 194 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TBPL1P62380 186 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 YBX1P67809 324 aaKnown RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ABATP80404 500 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ACY1Q03154 408 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PRDX1Q06830 199 aaKnown RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 KCNAB1Q14722 419 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 C18orf21Q32NC0 220 aaPredicted RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 MINDY4Q4G0A6 757 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FBXO48Q5FWF7 155 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 BEND6Q5SZJ8 279 aaPredicted RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 DCAF12Q5T6F0 453 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 KIAA1614Q5VZ46 1190 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ICE2Q659A1 982 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FBXO42Q6P3S6 717 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FIGLAQ6QHK4 219 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 THOC6Q86W42 341 aaKnown RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 C17orf64Q86WR6 236 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 KMT5CQ86Y97 462 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TDRPQ86YL5 185 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 LRRC56Q8IYG6 542 aaPredicted RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CENPLQ8N0S6 344 aaPredicted RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 IQCKQ8N0W5 287 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CNPY4Q8N129 248 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CARFQ8N187 725 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 C4orf33Q8N1A6 199 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 Q8N1Y9 231 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TCAIMQ8N3R3 496 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 D2HGDHQ8N465 521 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 MYRIPQ8NFW9 859 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 OR2L3Q8NG85 312 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 OR2A1Q8NGT9 310 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 OR56A3Q8NH54 315 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FLVCR1-AS1Q8TAF5 88 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 RHEBL1Q8TAI7 183 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ACMSDQ8TDX5 336 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ESAMQ96AP7 390 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 RHBDF1Q96CC6 855 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FBXL8Q96CD0 374 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 RNF31Q96EP0 1072 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 HSPBAP1Q96EW2 488 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PRR11Q96HE9 360 aaPredicted RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SLC46A1Q96NT5 459 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PRAP1Q96NZ9 151 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 GPR78Q96P69 363 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ZIM3Q96PE6 472 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 OR6C1Q96RD1 312 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TAAR9Q96RI9 348 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 JMJD8Q96S16 334 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SPOCK3Q9BQ16 436 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 MRPL57Q9BQC6 102 aaKnown RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 APMAPQ9HDC9 416 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FAM60AQ9NP50 221 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FBXO8Q9NRD0 319 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 WWOXQ9NZC7 414 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 NUDT4Q9NZJ9 180 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TMEM216Q9P0N5 145 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CPSF2Q9P2I0 782 aaKnown RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 DCDC2Q9UHG0 476 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SERTAD3Q9UJW9 196 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 RARRES3Q9UL19 164 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 WASF3Q9UPY6 502 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SLC22A14Q9Y267 594 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 COA3Q9Y2R0 106 aaPredicted RBP5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 KCNE2Q9Y6J6 123 aa5.56□□□□□ -1.52
SCARNA6.1-201ENST00000516989 A0A1W2PNU3 283 aaPredicted RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CCDC189A1A4V9 331 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TARM1B6A8C7 271 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 COPEO14579 308 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms