RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SSR2P43308 183 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 GSTM5P46439 218 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RXRGP48443 463 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PPM1FP49593 454 aaPredicted RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ARFIP1P53367 373 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 MAPK12P53778 367 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TAS2R50P59544 299 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ACTR3P61158 418 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 STXBP1P61764 594 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PLIN5Q00G26 463 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RELAQ04206 551 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TGM3Q08188 693 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SIM2Q14190 667 aaPredicted RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SNCBQ16143 134 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CCDC6Q16204 474 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ADPRMQ3LIE5 342 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SPATS1Q496A3 300 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TOR1AIP1Q5JTV8 583 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 C6orf132Q5T0Z8 1188 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CPTPQ5TA50 214 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ANXA8L1Q5VT79 327 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 FCRL6Q6DN72 434 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 OR4C11Q6IEV9 310 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 OR4F3Q6IEY1 312 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 FAM71E1Q6IPT2 247 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TRIM40Q6P9F5 258 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 DLEU7Q6UYE1 221 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 IKBIPQ70UQ0 350 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 R3HCC1LQ7Z5L2 792 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ASPGQ86U10 573 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 C17orf82Q86X59 251 aaPredicted RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SLC15A3Q8IY34 581 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SRFBP1Q8NEF9 429 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 OR2L5Q8NG80 312 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 OR7A2PQ8NGA2 310 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 OR8J2Q8NGG1 315 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 BAHD1Q8TBE0 780 aaPredicted RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 DNAJB14Q8TBM8 379 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 JADE3Q92613 823 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PIGKQ92643 395 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RSC1A1Q92681 617 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 GTF2H4Q92759 462 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 MS4A6EQ96DS6 147 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 MTERF3Q96E29 417 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 THAP11Q96EK4 314 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ZC3H10Q96K80 434 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PPM1MQ96MI6 270 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ELF4Q99607 663 aaPredicted RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CGREF1Q99674 301 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 C17orf62Q9BQA9 187 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 DUSP26Q9BV47 211 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SORBS1Q9BX66 1292 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ZNF717Q9BY31 904 aaPredicted RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 REXO4Q9GZR2 422 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 KCNH6Q9H252 994 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TMEM74BQ9NUR3 256 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ATAD3AQ9NVI7 634 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 FAM120CQ9NX05 1096 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SH3BP4Q9P0V3 963 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SLAMF8Q9P0V8 285 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ABCD2Q9UBJ2 740 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SUCOQ9UBS9 1254 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ATP6V1HQ9UI12 483 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ADAM29Q9UKF5 820 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 POMT2Q9UKY4 750 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 MAN2B2Q9Y2E5 1009 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 KLK4Q9Y5K2 254 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SCN3AQ9NY46 2000 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CABIN1Q9Y6J0 2220 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 A0A096LPI6 279 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 A0A0G2JN53 185 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 A0A0J9YVX5 310 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PRORSD1PA6NEY8 169 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 GABRR3A8MPY1 467 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RFXANKO14593 260 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 MAP3K7O43318 606 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ERI3O43414 337 aaKnown RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 DFNA5O60443 496 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CTSVO60911 334 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ANP32DO95626 131 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 STATHP02808 62 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CFIP05156 583 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 IL3P08700 152 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 FURINP09958 794 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 LAMP1P11279 417 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PIM1P11309 404 aaPredicted RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 HSD17B1P14061 328 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PVRP15151 417 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TCN1P20061 433 aaPredicted RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CDH3P22223 829 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 HOXD12P35452 270 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 MSX2P35548 267 aaPredicted RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TSFMP43897 325 aaKnown RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CAPZBP47756 277 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 LSSP48449 732 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TRPC1P48995 793 aa7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 HNRNPFP52597 415 aaKnown RBP7.28□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PLA2G16P53816 162 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms