RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 NAALAD2Q9Y3Q0 740 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 BAHCC1Q9P281 2608 aa12.08□□□□□ -0.47
CLCN3-210ENST00000515420 IGHV1-45A0A0A0MS14 117 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 EXOC1LA0A1B0GW35 172 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 K7EPI3 171 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 SGK494L7N484 410 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 UBXN8O00124 270 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 RIPK2O43353 540 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 CCNT2O60583 730 aaKnown RBP12.08□□□□□ -0.48
CLCN3-210ENST00000515420 ALOX12BO75342 701 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 RDH16O75452 317 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 CLEC3AO75596 197 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 SERPIND1P05546 499 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 RBP1P09455 135 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 SMIM10L1P0DMW3 83 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 COX6A1P12074 109 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 TNFRSF8P28908 595 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 GMPRP36959 345 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 AGTR2P50052 363 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 ALDH18A1P54886 795 aaKnown RBP12.08□□□□□ -0.48
CLCN3-210ENST00000515420 HYAL2Q12891 473 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 NAA30Q147X3 362 aaPredicted RBP12.08□□□□□ -0.48
CLCN3-210ENST00000515420 SETDB1Q15047 1291 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 XKR6Q5GH73 641 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 LGSNQ5TDP6 509 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 IRAK1BP1Q5VVH5 260 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 RIPOR1Q6ZS17 1223 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLCN3-210ENST00000515420 SNX31Q8N9S9 440 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 UTP15Q8TED0 518 aaKnown RBP12.08□□□□□ -0.48
CLCN3-210ENST00000515420 METTL21AQ8WXB1 218 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 TM9SF4Q92544 642 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 EXT2Q93063 718 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 GAL3ST3Q96A11 431 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 ESAMQ96AP7 390 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 MTBPQ96DY7 904 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 SMIM10Q96HG1 83 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 GPR78Q96P69 363 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 TXLNGYQ9BZA5 131 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 VN1R1Q9GZP7 353 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 LHPPQ9H008 270 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 OPTCQ9UBM4 332 aa12.08□□□□□ -0.48
CLCN3-210ENST00000515420 C19orf25Q9UFG5 118 aaPredicted RBP12.08□□□□□ -0.48
CLCN3-210ENST00000515420 TNPO3Q9Y5L0 923 aaKnown RBP12.08□□□□□ -0.48
CLCN3-210ENST00000515420 GCN1Q92616 2671 aaKnown RBP12.08□□□□□ -0.48
CLCN3-210ENST00000515420 A0A088AWK7 358 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 NSG1A0A0A6YYJ2 146 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 ANKDD1BA6NHY2 528 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 A6NL46 340 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 POC1B-GALNT4F8VUJ3 575 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 FFAR3O14843 346 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 GPR42O15529 346 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 PRAMEF4O60810 478 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 WFS1O76024 890 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 SNRPAP09012 282 aaKnown RBP12.07□□□□□ -0.48
CLCN3-210ENST00000515420 ZNF888P0CJ79 500 aaPredicted RBP12.07□□□□□ -0.48
CLCN3-210ENST00000515420 C8orf89P0DMQ9 161 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 ICAM2P13598 275 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 EPB42P16452 691 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 EPORP19235 508 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 ZNF10P21506 573 aaPredicted RBP12.07□□□□□ -0.48
CLCN3-210ENST00000515420 JAK1P23458 1154 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 ITGA3P26006 1051 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 SERPINB1P30740 379 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 IRF8Q02556 426 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 TLE1Q04724 770 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 CHIT1Q13231 466 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 DOC2AQ14183 400 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 PCBP2Q15366 365 aaKnown RBP eCLIP12.07□□□□□ -0.483e-6■■■■□ 25.7
CLCN3-210ENST00000515420 HIST2H2ACQ16777 129 aaPredicted RBP12.07□□□□□ -0.48
CLCN3-210ENST00000515420 ADPRMQ3LIE5 342 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 DEFB134Q4QY38 66 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 TECRLQ5HYJ1 363 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 PRAMEF9Q5VWM5 478 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 HIST2H2AA3Q6FI13 130 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 ADGRD1Q6QNK2 874 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 TIFABQ6ZNK6 161 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 LCA5Q86VQ0 697 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 PLPP5Q8NEB5 264 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 UBE2E3Q969T4 207 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 SCN2AQ99250 2005 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 TUBB6Q9BUF5 446 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 ZNF700Q9H0M5 742 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 EPN3Q9H201 632 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 VPS11Q9H270 941 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 RHBGQ9H310 441 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 HCN3Q9P1Z3 774 aa12.07□□□□□ -0.48
CLCN3-210ENST00000515420 LRIT2A6NDA9 550 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 TRIM49D1C9J1S8 452 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 UGDHO60701 494 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 SORBS2O94875 1100 aaKnown RBP12.06□□□□□ -0.48
CLCN3-210ENST00000515420 FHP07954 510 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 GFAPP14136 432 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 CD22P20273 847 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 GLRBP48167 497 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 PIK3CGP48736 1102 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 MINDY4Q4G0A6 757 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 FBXO48Q5FWF7 155 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 TOR1AIP1Q5JTV8 583 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 AGAP7PQ5VUJ5 663 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms