RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 RNF175Q8N4F7 328 aa2.23□□□□□ -2.05
NEDD4-211ENST00000514893 BEST4Q8NFU0 473 aa2.23□□□□□ -2.05
NEDD4-211ENST00000514893 ZBED6CLQ96FA7 236 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-211ENST00000514893 PGM2Q96G03 612 aa2.23□□□□□ -2.05
NEDD4-211ENST00000514893 PPM1MQ96MI6 270 aa2.23□□□□□ -2.05
NEDD4-211ENST00000514893 SLC2A11Q9BYW1 496 aa2.23□□□□□ -2.05
NEDD4-211ENST00000514893 ITGA11Q9UKX5 1188 aa2.23□□□□□ -2.05
NEDD4-211ENST00000514893 GON4LQ3T8J9 2241 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 A0A087X0M5 115 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 TEX48A0A1B0GUV7 120 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 A0A1B0GX30 115 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 PI4KAP2A4QPH2 592 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 E2F3O00716 465 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 TBX18O95935 607 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 P0C879 139 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 FEN1P39748 380 aaKnown RBP2.22□□□□□ -2.05
NEDD4-211ENST00000514893 FNTAP49354 379 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 CLDN15P56746 228 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 ILF2Q12905 390 aaKnown RBP2.22□□□□□ -2.05
NEDD4-211ENST00000514893 CRMP1Q14194 572 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 TMEM95Q3KNT9 176 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 MACC1Q6ZN28 852 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 FRAT1Q92837 279 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-211ENST00000514893 NSUN4Q96CB9 384 aaKnown RBP2.22□□□□□ -2.05
NEDD4-211ENST00000514893 TNFRSF13CQ96RJ3 184 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 MCCC1Q96RQ3 725 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-211ENST00000514893 HSD17B14Q9BPX1 270 aa2.22□□□□□ -2.05
NEDD4-211ENST00000514893 DDX25Q9UHL0 483 aaKnown RBP2.22□□□□□ -2.05
NEDD4-211ENST00000514893 ZNF346Q9UL40 294 aaKnown RBP2.22□□□□□ -2.05
NEDD4-211ENST00000514893 ZFP37Q9Y6Q3 630 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-211ENST00000514893 A0A1W2PPK0 400 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 EPOPA6NHQ4 379 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 ATP6AP2O75787 350 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 ACTL6AO96019 429 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 F3P13726 295 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 GDF1P27539 372 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 PRKAR2BP31323 418 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 STAT2P52630 851 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 ARF3P61204 181 aaPredicted RBP2.21□□□□□ -2.06
NEDD4-211ENST00000514893 ARF1P84077 181 aaKnown RBP2.21□□□□□ -2.06
NEDD4-211ENST00000514893 ECSCRQ19T08 205 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 LIPJQ5W064 366 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 REP15Q6BDI9 236 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 TSPAN14Q8NG11 270 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 ST6GALNAC6Q969X2 333 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 ZBP1Q9H171 429 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 PRMT7Q9NVM4 692 aaPredicted RBP2.21□□□□□ -2.06
NEDD4-211ENST00000514893 SLC24A2Q9UI40 661 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 RNF150Q9ULK6 438 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 RAB26Q9ULW5 256 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 GTF2A1LQ9UNN4 478 aa2.21□□□□□ -2.06
NEDD4-211ENST00000514893 PTRH2Q9Y3E5 179 aaKnown RBP2.21□□□□□ -2.06
NEDD4-211ENST00000514893 NPHP1O15259 732 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 TSC22D2O75157 780 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 DNTTP04053 509 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 CSN3P07498 182 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 NRIP1P48552 1158 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 IRGCQ6NXR0 463 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 DND1Q8IYX4 353 aaKnown RBP2.2□□□□□ -2.06
NEDD4-211ENST00000514893 ZNF561Q8N587 486 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 ZNF564Q8TBZ8 553 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-211ENST00000514893 SLCO4A1Q96BD0 722 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 STARD4Q96DR4 205 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 RIMS4Q9H426 269 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-211ENST00000514893 C3orf14Q9HBI5 128 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 EXOC1Q9NV70 894 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 C9orf78Q9NZ63 289 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-211ENST00000514893 MOKQ9UQ07 419 aa2.2□□□□□ -2.06
NEDD4-211ENST00000514893 TRBV5-4A0A0C4DH59 114 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 F5H0A9 414 aaPredicted RBP2.19□□□□□ -2.06
NEDD4-211ENST00000514893 SIGLEC5O15389 551 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 TPD52L2O43399 206 aaKnown RBP2.19□□□□□ -2.06
NEDD4-211ENST00000514893 USO1O60763 962 aaKnown RBP2.19□□□□□ -2.06
NEDD4-211ENST00000514893 IGLV1-47P01700 117 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 ADARP55265 1226 aaKnown RBP2.19□□□□□ -2.06
NEDD4-211ENST00000514893 LINC00315P59091 139 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 FASTKQ14296 549 aaKnown RBP2.19□□□□□ -2.06
NEDD4-211ENST00000514893 PCK2Q16822 640 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 TFDP3Q5H9I0 405 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 ZNF544Q6NX49 715 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 RFWD3Q6PCD5 774 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 Q6ZVQ6 151 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 MKXQ8IYA7 352 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 CFAP61Q8NHU2 1237 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 PCNPQ8WW12 178 aaKnown RBP2.19□□□□□ -2.06
NEDD4-211ENST00000514893 ZNF622Q969S3 477 aaKnown RBP eCLIP2.19□□□□□ -2.062e-6■■■□□ 17.6
NEDD4-211ENST00000514893 FEVQ99581 238 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 NDNQ99608 321 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 GDE1Q9NZC3 331 aa2.19□□□□□ -2.06
NEDD4-211ENST00000514893 NIP7Q9Y221 180 aaKnown RBP eCLIP2.19□□□□□ -2.06
NEDD4-211ENST00000514893 ARID1AO14497 2285 aa2.18□□□□□ -2.06
NEDD4-211ENST00000514893 FOXI3A8MTJ6 420 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-211ENST00000514893 ZNF487B1APH4 448 aa2.18□□□□□ -2.06
NEDD4-211ENST00000514893 PANO1I0J062 215 aa2.18□□□□□ -2.06
NEDD4-211ENST00000514893 PDXKO00764 312 aa2.18□□□□□ -2.06
NEDD4-211ENST00000514893 AP3D1O14617 1153 aa2.18□□□□□ -2.06
NEDD4-211ENST00000514893 SKILP12757 684 aa2.18□□□□□ -2.06
NEDD4-211ENST00000514893 RPS2P15880 293 aaKnown RBP2.18□□□□□ -2.06
NEDD4-211ENST00000514893 CD22P20273 847 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms