RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 IL26Q9NPH9 171 aa13.4□□□□□ -0.26
TSPAN17-208ENST00000514705 FBXO8Q9NRD0 319 aa13.4□□□□□ -0.26
TSPAN17-208ENST00000514705 NUFIP1Q9UHK0 495 aaKnown RBP13.4□□□□□ -0.26
TSPAN17-208ENST00000514705 RIMKLBQ9ULI2 386 aa13.4□□□□□ -0.26
TSPAN17-208ENST00000514705 DRGXA6NNA5 263 aa13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 PCDH7O60245 1069 aa13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 PRAMEF12O95522 483 aa13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 HNF1BP35680 557 aa13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 RGS6P49758 472 aa13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 DDX53Q86TM3 631 aaKnown RBP13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 TSPAN33Q86UF1 283 aa13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 NPAS3Q8IXF0 933 aa13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 ENTHD1Q8IYW4 607 aa13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 PJA1Q8NG27 643 aa13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 SLC22A4Q9H015 551 aa13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 SMURF1Q9HCE7 757 aa13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 MRPS7Q9Y2R9 242 aaKnown RBP13.4□□□□□ -0.27
TSPAN17-208ENST00000514705 CLDN24A6NM45 220 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 TAPBPO15533 448 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 TSPAN12O95859 305 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 YES1P07947 543 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 CCNYL3P0C7X3 344 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 SNAP47Q5SQN1 464 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 TRAPPC5Q8IUR0 188 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 MFSD4AQ8N468 514 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 ARL14EPQ8N8R7 260 aaPredicted RBP13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 TMEM45AQ9NWC5 275 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 FAM120CQ9NX05 1096 aaKnown RBP13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 ZNF624Q9P2J8 865 aaPredicted RBP13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 MOSPD1Q9UJG1 213 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 ZNF623O75123 536 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 GUCY1B2O75343 617 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 C6orf47O95873 294 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 SPNP16150 400 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 PPM1FP49593 454 aaPredicted RBP13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 CDK6Q00534 326 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 DCST1Q5T197 706 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 C7orf57Q8NEG2 295 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 ART5Q96L15 291 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 CTRCQ99895 268 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 OR2A25A4D2G3 310 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 METTL15A6NJ78 407 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 TLR4O00206 839 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 SYN3O14994 580 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 CTNNB1P35222 781 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 PPM1AP35813 382 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 SOX3P41225 446 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 GATMP50440 423 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 TARDBPQ13148 414 aaKnown RBP eCLIP13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 SNAPC1Q16533 368 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 CACTIN-AS1Q8N1I8 211 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 TCEANCQ8N8B7 351 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 C9orf43Q8TAL5 461 aaPredicted RBP13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 POLR2J3Q9H1A7 115 aaKnown RBP13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 SEMA3GQ9NS98 782 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 ABCB8Q9NUT2 735 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 CLCA3PQ9Y6N3 262 aa13.39□□□□□ -0.27
TSPAN17-208ENST00000514705 FAM172BPA6NC97 362 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 COCHO43405 550 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 PRSS23O95084 383 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 C8GP07360 202 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 RING1Q06587 406 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 ERAP2Q6P179 960 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 LRRC70Q7Z2Q7 622 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 LAPTM4BQ86VI4 370 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 B3GNT7Q8NFL0 401 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 RNFT2Q96EX2 444 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 EMILIN2Q9BXX0 1053 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 KATNBL1Q9H079 304 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 ZDHHC3Q9NYG2 299 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 ZNF282Q9UDV7 671 aaPredicted RBP13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 MED16Q9Y2X0 877 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 PRKAB1Q9Y478 270 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 PCDHB11Q9Y5F2 797 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 SNTNA6NMZ2 147 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 ANKRD28O15084 1053 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 CDK1P06493 297 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 TALDO1P37837 337 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 KRT33BQ14525 404 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 LRIT3Q3SXY7 679 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 LRRC66Q68CR7 880 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 KDM4DQ6B0I6 523 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 RNF130Q86XS8 419 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 XAGE5Q8WWM1 108 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 SLIRPQ9GZT3 109 aaKnown RBP13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 TBC1D17Q9HA65 648 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 ING3Q9NXR8 418 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 HCN4Q9Y3Q4 1203 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 ADAMTS4O75173 837 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 BPIP17213 487 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 SSTR4P31391 388 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 TNFSF8P32971 234 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 MANFP55145 182 aaKnown RBP13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 HNRNPA0Q13151 305 aaKnown RBP13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 GPR33Q49SQ1 333 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 RNASE12Q5GAN4 147 aaKnown RBP13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 DDI2Q5TDH0 399 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 LUZP2Q86TE4 346 aa13.38□□□□□ -0.27
TSPAN17-208ENST00000514705 MSRB3Q8IXL7 192 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms