RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 BOLA3Q53S33 107 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 PITRM1Q5JRX3 1037 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 RBM20Q5T481 1227 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 DDI2Q5TDH0 399 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 C1orf189Q5VU69 101 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM198Q66K66 360 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ARHGAP11AQ6P4F7 1023 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZPBP2Q6X784 338 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 HACD2Q6Y1H2 254 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 STK32CQ86UX6 486 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 LONP2Q86WA8 852 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SNX32Q86XE0 403 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 C10orf107Q8IVU9 208 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 MINDY1Q8N5J2 469 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TSPAN14Q8NG11 270 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR13C3Q8NGS6 347 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 METTL21AQ8WXB1 218 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 NINJ1Q92982 152 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 BORCS7Q96B45 105 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 OTUB2Q96DC9 234 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 VCPIP1Q96JH7 1222 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF347Q96SE7 839 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 GAD1Q99259 594 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CLPBQ9H078 707 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 GOLGA2P5Q9HBQ8 144 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 NECTIN3Q9NQS3 549 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRMT13Q9NUP7 481 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SPG21Q9NZD8 308 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF624Q9P2J8 865 aaPredicted RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 GNG13Q9P2W3 67 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 PHF11Q9UIL8 331 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF229Q9UJW7 825 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC39A10Q9ULF5 831 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 AKT3Q9Y243 479 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 DNAJC16Q9Y2G8 782 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF175Q9Y473 711 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 USP15Q9Y4E8 981 aaPredicted RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 DNAJC15Q9Y5T4 150 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 MUC2Q02817 5179 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM237BA0A1B0GVD1 139 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 HEATR9A2RTY3 570 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 C5orf51A6NDU8 294 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 J3QR89 54 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 M0QZ24 198 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 GTPBP1O00178 669 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC28A1O00337 649 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 E2F3O00716 465 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 MAN2B1O00754 1011 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 PRRG1O14668 218 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 BCAT2O15382 392 aaPredicted RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TSPAN1O60635 241 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 MAFKO60675 156 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 XYLBO75191 536 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ECI2O75521 394 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CLPXO76031 633 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SOX30O94993 753 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 GOSR1O95249 250 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 BPNT1O95861 308 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CFBP00751 764 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 HLA-DQA2P01906 255 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 RLN2P04090 185 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 IFNA6P05013 189 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC2A3P11169 496 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC2A4P14672 509 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 MUC1P15941 1255 aaPredicted RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ITGALP20701 1170 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 OGNP20774 298 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SDHBP21912 280 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 IGFBP4P22692 258 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 BDNFP23560 247 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SSTR1P30872 391 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 NTSP30990 170 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 AVPR1AP37288 418 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 RFC5P40937 340 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ID4P47928 161 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 KCNJ5P48544 419 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 RGS7P49802 495 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 BST1Q10588 318 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 NAB1Q13506 487 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 LAPTM5Q13571 262 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 PGM5Q15124 567 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRIP13Q15645 432 aaPredicted RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC36A2Q495M3 483 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TIGD5Q53EQ6 642 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ARMCX4Q5H9R4 360 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM201Q5SNT2 666 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC25A30Q5SVS4 291 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 PDSS1Q5T2R2 415 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SYT6Q5T7P8 510 aaPredicted RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 VWA5B1Q5TIE3 1220 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 AGAP7PQ5VUJ5 663 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 AGAP6Q5VW22 663 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPR107Q5VW38 600 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 GGNBP1Q5YKI7 109 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 C16orf87Q6PH81 154 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 UNC5AQ6ZN44 842 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 RFX8Q6ZV50 586 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 PRSS48Q7RTY5 328 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 LRRC70Q7Z2Q7 622 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms