RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 MBD6Q96DN6 1003 aa17.74■□□□□ 0.43
HMGCS1-206ENST00000511774 EBNA1BP2Q99848 306 aaKnown RBP17.74■□□□□ 0.43
HMGCS1-206ENST00000511774 FAM114A2Q9NRY5 505 aa17.74■□□□□ 0.43
HMGCS1-206ENST00000511774 CRIM1Q9NZV1 1036 aa17.74■□□□□ 0.43
HMGCS1-206ENST00000511774 CRYL1Q9Y2S2 319 aa17.74■□□□□ 0.43
HMGCS1-206ENST00000511774 SAGE2PA6NJ88 616 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 FAM166BA8MTA8 275 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 SLC16A5O15375 505 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 SYF2O95926 243 aaKnown RBP17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 ACVR2AP27037 513 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 HSD17B2P37059 387 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 SESN2P58004 480 aaPredicted RBP17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 TBX2Q13207 712 aaPredicted RBP17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 PCID2Q5JVF3 399 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 THEMIS2Q5TEJ8 643 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 C16orf47Q6ZP98 133 aaPredicted RBP17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 CYP4Z2PQ8N1L4 340 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 AFAP1L2Q8N4X5 818 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 FBXO15Q8NCQ5 510 aaPredicted RBP17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 ASB11Q8WXH4 323 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 SLCO2A1Q92959 643 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 SLC24A3Q9HC58 644 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 ZNF223Q9UK11 482 aaPredicted RBP17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 PACSIN2Q9UNF0 486 aaPredicted RBP17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 MED16Q9Y2X0 877 aa17.73■□□□□ 0.43
HMGCS1-206ENST00000511774 A8MUA0 341 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 CHST10O43529 356 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 B4GALT2O60909 372 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 TPM3P06753 285 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 CHRM3P20309 590 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 MAOAP21397 527 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 FDFT1P37268 417 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 ZFP36L2P47974 494 aaKnown RBP17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 CLCN7P51798 805 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 DGKQP52824 942 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 CUL1Q13616 776 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 OASLQ15646 514 aaKnown RBP17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 PAMR1Q6UXH9 720 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 CYHR1Q6ZMK1 362 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 ASPGQ86U10 573 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 CAMKVQ8NCB2 501 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 APCDD1LQ8NCL9 501 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 TBC1D20Q96BZ9 403 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 MFSD3Q96ES6 412 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 DEFB126Q9BYW3 111 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 SLC6A16Q9GZN6 736 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 ZDHHC11Q9H8X9 412 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 DMRT3Q9NQL9 472 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 RAB6BQ9NRW1 208 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 SLC22A7Q9Y694 548 aa17.72■□□□□ 0.43
HMGCS1-206ENST00000511774 NCKAP5O14513 1909 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 IGKV3D-11A0A0A0MRZ8 115 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 GRID2IPA4D2P6 1211 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 ZNF839A8K0R7 811 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 PRKNO60260 465 aaPredicted RBP17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 VAPBO95292 243 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 TPM1P09493 284 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 SKIV2L2P42285 1042 aaKnown RBP17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 TBPL1P62380 186 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 PPIAP62937 165 aaKnown RBP17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 ZNF585AQ6P3V2 769 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 OTUD6BQ8N6M0 293 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 ZNF740Q8NDX6 193 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 SLC13A3Q8WWT9 602 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 THAP11Q96EK4 314 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 C18orf12Q96KH6 178 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 PTCHD1Q96NR3 888 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 NECTIN3Q9NQS3 549 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 KCMF1Q9P0J7 381 aa17.71■□□□□ 0.43
HMGCS1-206ENST00000511774 TRBV11-1A0A0K0K1C0 115 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 GOLGA6L9A6NEM1 432 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 A6NNC1 897 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 AKR1B15C9JRZ8 316 aaPredicted RBP17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 E7EVH7 732 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 GFYI3L273 518 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 FCHO1O14526 889 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 GALR3O60755 368 aaPredicted RBP17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 ITGA10O75578 1167 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 ATE1O95260 518 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 IFNB1P01574 187 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 ESR1P03372 595 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 APRTP07741 180 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 IL10P22301 178 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 HOXC12P31275 282 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 CETN2P41208 172 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 KIR2DL3P43628 341 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 HYAL2Q12891 473 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 RPS6KA1Q15418 735 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 DEFB134Q4QY38 66 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 CAPN13Q6MZZ7 669 aaPredicted RBP17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 MBOAT1Q6ZNC8 495 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 CENPUQ71F23 418 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 TAOK1Q7L7X3 1001 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 PRELID2Q8N945 189 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 TC2NQ8N9U0 490 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 CNPPD1Q9BV87 410 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 LIN28AQ9H9Z2 209 aaKnown RBP17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 CBLCQ9ULV8 474 aa17.7■□□□□ 0.42
HMGCS1-206ENST00000511774 TCRBV16S1A1N1A0A5B0 115 aa17.69■□□□□ 0.42
HMGCS1-206ENST00000511774 CTAGE15A4D2H0 777 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms