RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 UMODP07911 640 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SBK3P0C264 359 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 ZNF888P0CJ79 500 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SMIM10L1P0DMW3 83 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SFTPCP11686 197 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 ALOX12P18054 663 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 IL1RNP18510 177 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 KRT4P19013 534 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 CD22P20273 847 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 MMP11P24347 488 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 ATP5F1P24539 256 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SERPINB1P30740 379 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 OTX2P32243 289 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 CRHR1P34998 444 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 HNF4AP41235 474 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SNRPNP63162 240 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 KLC1Q07866 573 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 HYAL2Q12891 473 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 GTF2H2Q13888 395 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 VWA2Q5GFL6 755 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 TOR1AIP1Q5JTV8 583 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 LIPJQ5W064 366 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 GRHL2Q6ISB3 625 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 GTF2H2CQ6P1K8 395 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 MED27Q6P2C8 311 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SHISA6Q6ZSJ9 500 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SH2D5Q6ZV89 423 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 MED25Q71SY5 747 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 PRSS41Q7RTY9 318 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 GOLGA7Q7Z5G4 137 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 MYLK4Q86YV6 388 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SLC22A9Q8IVM8 553 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 APLFQ8IW19 511 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 AFAP1L2Q8N4X5 818 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 ZCCHC10Q8TBK6 192 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 UTP15Q8TED0 518 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 CCT6BQ92526 530 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 ATP6V1E2Q96A05 226 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SMIM10Q96HG1 83 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 VPS50Q96JG6 964 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 ATP6V1G3Q96LB4 118 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 FER1L6-AS2Q96M78 137 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SPSB2Q99619 263 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 CRB3Q9BUF7 120 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 TMEM109Q9BVC6 243 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 TGIF2Q9GZN2 237 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 RHBGQ9H310 441 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SOX17Q9H6I2 414 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 NOL11Q9H8H0 719 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 IPPKQ9H8X2 491 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 ACTR8Q9H981 624 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 CLK4Q9HAZ1 481 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 PRM3Q9NNZ6 103 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SEMA3GQ9NS98 782 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 C14orf105Q9NVL8 296 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 ADGRE2Q9UHX3 823 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 PCTPQ9UKL6 214 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 GRID1Q9ULK0 1009 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 PCDHGA11Q9Y5H2 935 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 ZFHX4Q86UP3 3567 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SEC16AO15027 2179 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 A0A088AWK7 358 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 LRIT2A6NDA9 550 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 H0YIV9 168 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 COPEO14579 308 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 FFAR3O14843 346 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 PCDH17O14917 1159 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 RGS16O15492 202 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 GPR42O15529 346 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 DLX3O60479 287 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 GALR3O60755 368 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 RDH16O75452 317 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 BMP10O95393 424 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 CLDN9O95484 217 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 HEXBP07686 556 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 FAM87AP0C7U9 286 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 PCNAP12004 261 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 IMPDH1P20839 514 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 ZNF10P21506 573 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 IL10P22301 178 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 HNRNPH1P31943 449 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 ARL1P40616 181 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 CCNG1P51959 295 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 PRKAA2P54646 552 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 EMP2P54851 167 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 RRADP55042 308 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 POLE2P56282 527 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 FOXL2P58012 376 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 RAB8AP61006 207 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 HERVK_113P63132 956 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 BTN3A2P78410 334 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 MAT1AQ00266 395 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 TGM3Q08188 693 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 ATP1A4Q13733 1029 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 RBBP7Q16576 425 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 CPSF6Q16630 551 aaKnown RBP eCLIP6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 SYT16Q17RD7 645 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 CCDC153Q494R4 210 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 DEFB134Q4QY38 66 aa6.77□□□□□ -1.33
PDLIM5-215ENST00000511586 TMEM35AQ53FP2 167 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms