RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SLC22A4Q9H015 551 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 HIPK3Q9H422 1215 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 PIGUQ9H490 435 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 NARFLQ9H6Q4 476 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 GORASP2Q9H8Y8 452 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRPV4Q9HBA0 871 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TXNRD2Q9NNW7 524 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 RPRD1BQ9NQG5 326 aaKnown RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 C19orf12Q9NSK7 152 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 BLOC1S4Q9NUP1 217 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 GIMAP2Q9UG22 337 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 FETUBQ9UGM5 382 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 LIMA1Q9UHB6 759 aaKnown RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF221Q9UK13 617 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 UTS2RQ9UKP6 389 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 GAB2Q9UQC2 676 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 GMPPBQ9Y5P6 360 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 CEPT1Q9Y6K0 416 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZMYM6O95789 1325 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 MN1Q10571 1320 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 DLG5Q8TDM6 1919 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 RGPD2P0DJD1 1756 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 KDM3BQ7LBC6 1761 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PQLC2LA1A4F0 135 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 AGAP5A6NIR3 686 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SAC3D1A6NKF1 404 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CENPXA8MT69 81 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 FOXO6A8MYZ6 492 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF487B1APH4 448 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 BTBD18B2RXH4 712 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 B4DGG1 531 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 GPR89AB7ZAQ6 455 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 B9A039 149 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PROB1E7EW31 1015 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 EEF2KO00418 725 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZBTB5O15062 677 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SNAP91O60641 907 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 MAGEC1O60732 1142 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SOCS5O75159 536 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 TBX10O75333 385 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRIM3O75382 744 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CCNB2O95067 398 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 KAT7O95251 611 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CRYABP02511 175 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 APOA1P02647 267 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 IFNA4P05014 189 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM58BPP0C7Q3 252 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 GPR89BP0CG08 455 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRAPPC2P0DI81 140 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRAPPC2BP0DI82 140 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CDH1P12830 882 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 FDPSP14324 419 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PKMP14618 531 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CNTFP26441 200 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 MAPK3P27361 379 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 IL12AP29459 219 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 MAT2AP31153 395 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 NUP62P37198 522 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SPAM1P38567 509 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 GNPDA1P46926 289 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 RAB13P51153 203 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CYP2J2P51589 502 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARFIP1P53367 373 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CARD18P57730 90 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC26A5P58743 744 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 MAGOHP61326 146 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 AP1S1P61966 158 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 HNRNPKP61978 463 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 GALK2Q01415 458 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 DLG1Q12959 904 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 FADDQ13158 208 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SELENBP1Q13228 472 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SNTA1Q13424 505 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SCARB2Q14108 478 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 TFDP1Q14186 410 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARHGAP19Q14CB8 494 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PGM5Q15124 567 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 LTB4RQ15722 352 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SSX2Q16385 188 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 TYSND1Q2T9J0 566 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SMTNL2Q2TAL5 461 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PRTGQ2VWP7 1150 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 DPCR1Q3MIW9 517 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 MCMDC2Q4G0Z9 681 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC39A12Q504Y0 691 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 KRTCAP3Q53RY4 240 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 KIAA1755Q5JYT7 1200 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 PIK3CD-AS1Q5SR53 167 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 RSBN1Q5VWQ0 802 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 GPR139Q6DWJ6 353 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 HMBOX1Q6NT76 420 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 UGT3A1Q6NUS8 523 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 AADACL2Q6P093 401 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 TTC27Q6P3X3 843 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CCDC137Q6PK04 289 aaKnown RBP4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 CYP20A1Q6UW02 462 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 UGT2A3Q6UWM9 527 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 LUZP2Q86TE4 346 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 TMEM200AQ86VY9 491 aa4.48□□□□□ -1.69
HMGB3P13-201ENST00000511263 SYCE1Q8N0S2 351 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms