RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 CYC1P08574 325 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 EMP2P54851 167 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 IRF8Q02556 426 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 RGS1Q08116 209 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 CHIT1Q13231 466 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 LAPTM5Q13571 262 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 TSNAXIP1Q2TAA8 658 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 DEFB134Q4QY38 66 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 XKR6Q5GH73 641 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 ADNP2Q6IQ32 1131 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 LAS2Q8IYD9 372 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 PRSS58Q8IYP2 241 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 KRT78Q8N1N4 520 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 SNX31Q8N9S9 440 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 FDCSPQ8NFU4 85 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 OR51Q1Q8NH59 317 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 ZCCHC10Q8TBK6 192 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 ACMSDQ8TDX5 336 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 MRPL57Q9BQC6 102 aaKnown RBP11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 CRB3Q9BUF7 120 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 ZNF71Q9NQZ8 489 aaPredicted RBP11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 ACSS2Q9NR19 701 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 LANCL2Q9NS86 450 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 OPTCQ9UBM4 332 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 TP53TG5Q9Y2B4 290 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 TSC22D4Q9Y3Q8 395 aa11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 TNPO3Q9Y5L0 923 aaKnown RBP11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 MDC1Q14676 2089 aaKnown RBP11.11□□□□□ -0.63
HMGXB3-203ENST00000510472 MED13Q9UHV7 2174 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 STX16-NPEPL1H3BU86 382 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 STX16O14662 325 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 PCDH17O14917 1159 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 SUV39H1O43463 412 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 CHST10O43529 356 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 RDH16O75452 317 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 SIX3O95343 332 aaPredicted RBP11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 ZNF888P0CJ79 500 aaPredicted RBP11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 GFAPP14136 432 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 EPB42P16452 691 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 IL10P22301 178 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 HNRNPH1P31943 449 aaKnown RBP11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 HSD17B3P37058 310 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 Q0VFX4 171 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 NFATC3Q12968 1075 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 LACTB2Q53H82 288 aaPredicted RBP11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 NIPAL1Q6NVV3 410 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 ABHD13Q7L211 337 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 LCA5Q86VQ0 697 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 CYP4X1Q8N118 509 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 TEX9Q8N6V9 391 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 OR5T3Q8NGG3 340 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 AENQ8WTP8 325 aaKnown RBP11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 ZNF473Q8WTR7 871 aaKnown RBP11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 MS4A6EQ96DS6 147 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 QRFPRQ96P65 431 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 OR1F2PQ96R84 312 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 SMAD5Q99717 465 aaKnown RBP11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 CCDC77Q9BR77 488 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 SLC25A23Q9BV35 468 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 NUDT9Q9BW91 350 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 C1QTNF3Q9BXJ4 246 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 VN1R1Q9GZP7 353 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 MRPL46Q9H2W6 279 aaKnown RBP11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 PPCSQ9HAB8 311 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 ZBTB26Q9HCK0 441 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 ATP13A2Q9NQ11 1180 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 TMEM216Q9P0N5 145 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 HCN3Q9P1Z3 774 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 PSMC3IPQ9P2W1 217 aaPredicted RBP11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 XPR1Q9UBH6 696 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 FBXL4Q9UKA2 621 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 TMCO1Q9UM00 188 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 PCDHGB7Q9Y5F8 929 aa11.1□□□□□ -0.63
HMGXB3-203ENST00000510472 IQANK1A0A1B0GTG1 560 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 A0A1W2PPM1 405 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 OR2W5A6NFC9 320 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 URADA6NGE7 173 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 ZNF860A6NHJ4 632 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 SERPIND1P05546 499 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 COX6A1P12074 109 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 NR1D1P20393 614 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 HNF4AP41235 474 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 XCR1P46094 333 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 RAB8AP61006 207 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 STXBP1P61764 594 aaKnown RBP11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 RHAGQ02094 409 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 AIMP2Q13155 320 aaKnown RBP11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 RBBP7Q16576 425 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 PAGE2BQ5JRK9 111 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 TOR1AIP1Q5JTV8 583 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 LIPJQ5W064 366 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 GRHL2Q6ISB3 625 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 ABHD17CQ6PCB6 329 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 ASB18Q6ZVZ8 466 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 GOLGA7Q7Z5G4 137 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 UBE3DQ7Z6J8 389 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 GALNT16Q8N428 558 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 PTGR2Q8N8N7 351 aaPredicted RBP11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 L3MBTL4Q8NA19 623 aa11.09□□□□□ -0.63
HMGXB3-203ENST00000510472 CLEC1AQ8NC01 280 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms