RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 TIA1P31483 386 aaKnown RBP eCLIP5.73□□□□□ -1.49
CHD1-205ENST00000508756 CD300CQ08708 224 aa5.73□□□□□ -1.49
CHD1-205ENST00000508756 COX8CQ7Z4L0 72 aa5.73□□□□□ -1.49
CHD1-205ENST00000508756 FAM131BQ86XD5 332 aa5.73□□□□□ -1.49
CHD1-205ENST00000508756 ZC3H3Q8IXZ2 948 aaKnown RBP5.73□□□□□ -1.49
CHD1-205ENST00000508756 OR52B6Q8NGF0 335 aa5.73□□□□□ -1.49
CHD1-205ENST00000508756 IL12RB2Q99665 862 aa5.73□□□□□ -1.49
CHD1-205ENST00000508756 TRIM6Q9C030 488 aaPredicted RBP5.73□□□□□ -1.49
CHD1-205ENST00000508756 SHISA7A6NL88 538 aa5.72□□□□□ -1.49
CHD1-205ENST00000508756 MOCS2O96007 188 aaPredicted RBP5.72□□□□□ -1.49
CHD1-205ENST00000508756 IGHV3-13P01766 116 aa5.72□□□□□ -1.49
CHD1-205ENST00000508756 MT-ND2P03891 347 aa5.72□□□□□ -1.49
CHD1-205ENST00000508756 RPN1P04843 607 aaKnown RBP5.72□□□□□ -1.49
CHD1-205ENST00000508756 CLCN4P51793 760 aa5.72□□□□□ -1.49
CHD1-205ENST00000508756 POU5F1Q01860 360 aaKnown RBP5.72□□□□□ -1.49
CHD1-205ENST00000508756 CDO1Q16878 200 aa5.72□□□□□ -1.49
CHD1-205ENST00000508756 SPECC1Q5M775 1068 aa5.72□□□□□ -1.49
CHD1-205ENST00000508756 RASL10AQ92737 203 aa5.72□□□□□ -1.49
CHD1-205ENST00000508756 BSCL2Q96G97 398 aaPredicted RBP5.72□□□□□ -1.49
CHD1-205ENST00000508756 EDEM3Q9BZQ6 932 aa5.72□□□□□ -1.49
CHD1-205ENST00000508756 C5orf66Q9H5L9 145 aa5.72□□□□□ -1.49
CHD1-205ENST00000508756 C10orf88Q9H8K7 445 aa5.72□□□□□ -1.49
CHD1-205ENST00000508756 RPF1Q9H9Y2 349 aaKnown RBP5.72□□□□□ -1.49
CHD1-205ENST00000508756 GPN1Q9HCN4 374 aaPredicted RBP5.72□□□□□ -1.49
CHD1-205ENST00000508756 CTSZQ9UBR2 303 aa5.72□□□□□ -1.49
CHD1-205ENST00000508756 TRAV34A0A0B4J273 112 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 IGHV3-38A0A0C4DH36 116 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 NPIPA3F8WFD2 350 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 SELENOFO60613 162 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 HPRP00739 348 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 SP9P0CG40 484 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 IFNAR1P17181 557 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 GPR183P32249 361 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 CAPGP40121 348 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 MS4A18Q3C1V0 323 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 SPANXN4Q5MJ08 99 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 P2RY8Q86VZ1 359 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 METTL23Q86XA0 190 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 DZIP1Q86YF9 867 aaKnown RBP5.71□□□□□ -1.5
CHD1-205ENST00000508756 ABHD12Q8N2K0 398 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 TEX26Q8N6G2 289 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 C17orf47Q8NEP4 570 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 OR9Q2Q8NGE9 314 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.71□□□□□ -1.5
CHD1-205ENST00000508756 RAB11FIP5Q9BXF6 653 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 MINDY3Q9H8M7 445 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 NOCTQ9UK39 431 aaKnown RBP5.71□□□□□ -1.5
CHD1-205ENST00000508756 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHD1-205ENST00000508756 SATB2Q9UPW6 733 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 NCKAP1Q9Y2A7 1128 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 POMT1Q9Y6A1 747 aa5.71□□□□□ -1.5
CHD1-205ENST00000508756 PGRMC2O15173 223 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 MLNRO43193 412 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 POP4O95707 220 aaKnown RBP5.7□□□□□ -1.5
CHD1-205ENST00000508756 HOXC13P31276 330 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 ETV5P41161 510 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 NDST2P52849 883 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 SPINK14Q6IE38 97 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 ZNF770Q6IQ21 691 aaPredicted RBP5.7□□□□□ -1.5
CHD1-205ENST00000508756 SHQ1Q6PI26 577 aaKnown RBP5.7□□□□□ -1.5
CHD1-205ENST00000508756 DCLRE1AQ6PJP8 1040 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 TRMT11Q7Z4G4 463 aaKnown RBP5.7□□□□□ -1.5
CHD1-205ENST00000508756 CREBRFQ8IUR6 639 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 DND1Q8IYX4 353 aaKnown RBP5.7□□□□□ -1.5
CHD1-205ENST00000508756 OR2L2Q8NH16 312 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 NPRL2Q8WTW4 380 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 PDLIM5Q96HC4 596 aaKnown RBP5.7□□□□□ -1.5
CHD1-205ENST00000508756 LURAP1Q96LR2 239 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 ZNF577Q9BSK1 485 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 UBQLN3Q9H347 655 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 DPEP2Q9H4A9 486 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 C3orf14Q9HBI5 128 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 TMOD3Q9NYL9 352 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 ZHX2Q9Y6X8 837 aa5.7□□□□□ -1.5
CHD1-205ENST00000508756 A0A1B0GVY2 172 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 NKX6-3A6NJ46 265 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 SIGLEC5O15389 551 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 GOT1P17174 413 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 KIAA0141Q14154 515 aaPredicted RBP5.69□□□□□ -1.5
CHD1-205ENST00000508756 PSMD6Q15008 389 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 ZNF239Q16600 458 aaKnown RBP5.69□□□□□ -1.5
CHD1-205ENST00000508756 LRRC37A5PQ49AS3 106 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 SPOUT1Q5T280 376 aaKnown RBP5.69□□□□□ -1.5
CHD1-205ENST00000508756 KLHL10Q6JEL2 608 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 MACC1Q6ZN28 852 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 SLC47A2Q86VL8 602 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 VSIG1Q86XK7 387 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 MEX3DQ86XN8 651 aaKnown RBP5.69□□□□□ -1.5
CHD1-205ENST00000508756 CCDC185Q8N715 623 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 AMER3Q8N944 861 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 ZMAT2Q96NC0 199 aaKnown RBP5.69□□□□□ -1.5
CHD1-205ENST00000508756 TSSK2Q96PF2 358 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 GNB4Q9HAV0 340 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 KLK11Q9UBX7 282 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 RNF123Q5XPI4 1314 aa5.69□□□□□ -1.5
CHD1-205ENST00000508756 SIX3O95343 332 aaPredicted RBP5.68□□□□□ -1.5
CHD1-205ENST00000508756 GIFP27352 417 aa5.68□□□□□ -1.5
CHD1-205ENST00000508756 OR3A1P47881 315 aa5.68□□□□□ -1.5
CHD1-205ENST00000508756 GRB14Q14449 540 aa5.68□□□□□ -1.5
CHD1-205ENST00000508756 ZNF146Q15072 292 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms