RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 NLGN4XQ8N0W4 816 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 TMEM203Q969S6 136 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 TRMT2BQ96GJ1 504 aaKnown RBP12.39□□□□□ -0.43
SMG7-214ENST00000508461 RHBGQ9H310 441 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 PAK1IP1Q9NWT1 392 aaPredicted RBP12.39□□□□□ -0.43
SMG7-214ENST00000508461 NYNRINQ9P2P1 1898 aaKnown RBP12.39□□□□□ -0.43
SMG7-214ENST00000508461 FADS2P1A8MWK0 482 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 J3KTA2 159 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 CCDC159P0C7I6 412 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 GTF2E2P29084 291 aaKnown RBP12.39□□□□□ -0.43
SMG7-214ENST00000508461 MAT2AP31153 395 aaKnown RBP12.39□□□□□ -0.43
SMG7-214ENST00000508461 BCAP31P51572 246 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 PPP2R2BQ00005 443 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 B4GALNT1Q00973 533 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 ST3GAL4Q11206 333 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 BTN2A2Q8WVV5 523 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 NUS1Q96E22 293 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 CNPPD1Q9BV87 410 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 FAIMQ9NVQ4 179 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 TVP23BQ9NYZ1 205 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 DNAJC27Q9NZQ0 273 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 ATG2BQ96BY7 2078 aa12.39□□□□□ -0.43
SMG7-214ENST00000508461 FEZF1A0PJY2 475 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 H7BY64 318 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 ANKRD28O15084 1053 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 NUAK1O60285 661 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 VIPR2P41587 438 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 CTBSQ01459 385 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 ZZZ3Q8IYH5 903 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 CAMKK1Q8N5S9 505 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 RASGEF1AQ8N9B8 481 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 KBTBD8Q8NFY9 601 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 OR2A12Q8NGT7 310 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 USP7Q93009 1102 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 UBE2E3Q969T4 207 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 PRAP1Q96NZ9 151 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 FAM129BQ96TA1 746 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 DOHHQ9BU89 302 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 ITPAQ9BY32 194 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 REEP4Q9H6H4 257 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 MAGIXQ9H6Y5 334 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 ARID1BQ8NFD5 2236 aaPredicted RBP12.38□□□□□ -0.43
SMG7-214ENST00000508461 WASH3PC4AMC7 463 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 SLC9A3R1O14745 358 aaPredicted RBP12.38□□□□□ -0.43
SMG7-214ENST00000508461 CKMT1AP12532 417 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 RXRGP48443 463 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 UGT2B15P54855 530 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 TARDBPQ13148 414 aaKnown RBP eCLIP12.38□□□□□ -0.436e-6■■□□□ 11.6
SMG7-214ENST00000508461 SP140Q13342 867 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 RGNQ15493 299 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 TAB1Q15750 504 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 TRAF7Q6Q0C0 670 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 ZNF551Q7Z340 670 aaPredicted RBP12.38□□□□□ -0.43
SMG7-214ENST00000508461 PAPD5Q8NDF8 572 aaKnown RBP12.38□□□□□ -0.43
SMG7-214ENST00000508461 WDR48Q8TAF3 677 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 SMG7Q92540 1137 aaKnown RBP12.38□□□□□ -0.43
SMG7-214ENST00000508461 RAD51AP1Q96B01 352 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 ZBTB20Q9HC78 741 aaPredicted RBP12.38□□□□□ -0.43
SMG7-214ENST00000508461 MS4A12Q9NXJ0 267 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 GULP1Q9UBP9 304 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 KLHL3Q9UH77 587 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 CLCA2Q9UQC9 943 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 RNF6Q9Y252 685 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 BTBD3Q9Y2F9 522 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 GPSM3Q9Y4H4 160 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 FUOMA2VDF0 154 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 KCNK5O95279 499 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 PRNPP04156 253 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 MPC1LP0DKB6 136 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 DSTNP60981 165 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 C5orf22Q49AR2 442 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 RPS26P11Q5JNZ5 115 aaPredicted RBP12.38□□□□□ -0.43
SMG7-214ENST00000508461 DCDC5Q6ZRR9 648 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 HTR3DQ70Z44 454 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 TRIM69Q86WT6 500 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 CACTIN-AS1Q8N1I8 211 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 CAPSLQ8WWF8 208 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 SLC5A11Q8WWX8 675 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 TFGQ92734 400 aaPredicted RBP12.38□□□□□ -0.43
SMG7-214ENST00000508461 ARMC5Q96C12 935 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 PAWRQ96IZ0 340 aaKnown RBP12.38□□□□□ -0.43
SMG7-214ENST00000508461 ZNF347Q96SE7 839 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 EFCAB11Q9BUY7 163 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 TRMT61BQ9BVS5 477 aaKnown RBP12.38□□□□□ -0.43
SMG7-214ENST00000508461 FNDC11Q9BVV2 318 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 MARCH7Q9H992 704 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 FBXW2Q9UKT8 454 aa12.38□□□□□ -0.43
SMG7-214ENST00000508461 LOC110117498-PIK3R3F6TDL0 507 aa12.37□□□□□ -0.43
SMG7-214ENST00000508461 SNPHO15079 494 aa12.37□□□□□ -0.43
SMG7-214ENST00000508461 ACP5P13686 325 aa12.37□□□□□ -0.43
SMG7-214ENST00000508461 ISL1P61371 349 aa12.37□□□□□ -0.43
SMG7-214ENST00000508461 HBA1P69905 142 aa12.37□□□□□ -0.43
SMG7-214ENST00000508461 TSTQ16762 297 aaKnown RBP12.37□□□□□ -0.43
SMG7-214ENST00000508461 ZNF805Q5CZA5 627 aa12.37□□□□□ -0.43
SMG7-214ENST00000508461 DCST1Q5T197 706 aa12.37□□□□□ -0.43
SMG7-214ENST00000508461 PPP1R16AQ96I34 528 aa12.37□□□□□ -0.43
SMG7-214ENST00000508461 CCDC115Q96NT0 180 aa12.37□□□□□ -0.43
SMG7-214ENST00000508461 F2RL3Q96RI0 385 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms