RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 APMAPQ9HDC9 416 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 ENAMQ9NRM1 1142 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 KLHL14Q9P2G3 628 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 VPS29Q9UBQ0 182 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 A0A0G2JN53 185 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 A0A0G2JND7 137 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 A0A1W2PNU3 283 aaPredicted RBP13.5□□□□□ -0.25
RNF4-208ENST00000507247 FITM1A5D6W6 292 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 NPIPB8E9PQR5 432 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 TMX2-CTNND1H3BSU7 103 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 RTCAO00442 366 aaKnown RBP13.5□□□□□ -0.25
RNF4-208ENST00000507247 PLPP1O14494 284 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 RGS14O43566 566 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 SNX3O60493 162 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 PEX11AO75192 247 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 OR2B3O76000 313 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 B3GALT4O96024 378 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 PRR35P0CG20 571 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 ZNF888P0CJ79 500 aaPredicted RBP13.5□□□□□ -0.25
RNF4-208ENST00000507247 SMIM10L1P0DMW3 83 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 PRPH2P23942 346 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 PTX3P26022 381 aaPredicted RBP13.5□□□□□ -0.25
RNF4-208ENST00000507247 ETV5P41161 510 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 GCGRP47871 477 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 ITGA1P56199 1179 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 CBX1P83916 185 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 FOXM1Q08050 763 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 TBL3Q12788 808 aaKnown RBP13.5□□□□□ -0.25
RNF4-208ENST00000507247 CUL3Q13618 768 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 GALNTL6Q49A17 601 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 TCTE1Q5JU00 501 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 PRAMEF17Q5VTA0 474 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 TMEM214Q6NUQ4 689 aaKnown RBP13.5□□□□□ -0.25
RNF4-208ENST00000507247 LARP4Q71RC2 724 aaKnown RBP eCLIP13.5□□□□□ -0.25
RNF4-208ENST00000507247 MARCH9Q86YJ5 346 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 DTWD1Q8N5C7 304 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 ZNF655Q8N720 491 aaPredicted RBP13.5□□□□□ -0.25
RNF4-208ENST00000507247 UTP15Q8TED0 518 aaKnown RBP13.5□□□□□ -0.25
RNF4-208ENST00000507247 ADAMTS14Q8WXS8 1223 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 TUBGCP3Q96CW5 907 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 SMIM10Q96HG1 83 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 C10orf90Q96M02 699 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 CCT8L2Q96SF2 557 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 SIKE1Q9BRV8 207 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 SORBS1Q9BX66 1292 aaKnown RBP13.5□□□□□ -0.25
RNF4-208ENST00000507247 ZNF717Q9BY31 904 aaPredicted RBP13.5□□□□□ -0.25
RNF4-208ENST00000507247 STRADBQ9C0K7 418 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 REXO4Q9GZR2 422 aaKnown RBP13.5□□□□□ -0.25
RNF4-208ENST00000507247 AKTIPQ9H8T0 292 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 FANCEQ9HB96 536 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 LHX9Q9NQ69 397 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 RIC8BQ9NVN3 520 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 LOXL2Q9Y4K0 774 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 FER1L5A0AVI2 2057 aa13.5□□□□□ -0.25
RNF4-208ENST00000507247 FAM149AA5PLN7 773 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 ZSCAN9O15535 394 aaPredicted RBP13.49□□□□□ -0.25
RNF4-208ENST00000507247 ERI3O43414 337 aaKnown RBP13.49□□□□□ -0.25
RNF4-208ENST00000507247 SEMA3DO95025 777 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 TIAF1O95411 115 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 FAM107AO95990 144 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 ITIH1P19827 911 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 PLA2G16P53816 162 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 RAB8AP61006 207 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 STXBP1P61764 594 aaKnown RBP13.49□□□□□ -0.25
RNF4-208ENST00000507247 MC2RQ01718 297 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 KIAA0040Q15053 153 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 AP5B1Q2VPB7 878 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 LSM12Q3MHD2 195 aaKnown RBP13.49□□□□□ -0.25
RNF4-208ENST00000507247 RFTN2Q52LD8 501 aaPredicted RBP13.49□□□□□ -0.25
RNF4-208ENST00000507247 SPDYAQ5MJ70 313 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 C6orf136Q5SQH8 315 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 MANEAQ5SRI9 462 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 ABHD17CQ6PCB6 329 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 CHSY3Q70JA7 882 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 RAB11FIP2Q7L804 512 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 PRSS41Q7RTY9 318 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 SPATA21Q7Z572 469 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 ZFAND4Q86XD8 727 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 CACTIN-AS1Q8N1I8 211 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 METTL4Q8N3J2 472 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 C1orf52Q8N6N3 182 aaKnown RBP13.49□□□□□ -0.25
RNF4-208ENST00000507247 OR2L5Q8NG80 312 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 ACTRT2Q8TDY3 377 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 CHTF18Q8WVB6 975 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 PMEPA1Q969W9 287 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 GAL3ST3Q96A11 431 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 RNF31Q96EP0 1072 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 C11orf24Q96F05 449 aaPredicted RBP13.49□□□□□ -0.25
RNF4-208ENST00000507247 PPP3R2Q96LZ3 170 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 CMKLR1Q99788 373 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 CTRCQ99895 268 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 NLNQ9BYT8 704 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 LRTM1Q9HBL6 345 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 PFDN4Q9NQP4 134 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 PRDM7Q9NQW5 492 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 IRAK4Q9NWZ3 460 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 C1orf109Q9NX04 203 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 RARRES3Q9UL19 164 aa13.49□□□□□ -0.25
RNF4-208ENST00000507247 CCDC187A0A096LP49 1063 aa13.48□□□□□ -0.25
RNF4-208ENST00000507247 B4E171 279 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms