RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ANKRD33Q7Z3H0 272 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 MIER3Q7Z3K6 550 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 PRSS42Q7Z5A4 293 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 GPR141Q7Z602 305 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 RTN4RL2Q86UN3 420 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 ERC1Q8IUD2 1116 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 CROCCP3Q8IVE0 287 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 EID3Q8N140 333 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 DNAJC22Q8N4W6 341 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 METTL27Q8N6F8 245 aaPredicted RBP2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 NEK11Q8NG66 645 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 GRHL3Q8TE85 626 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 NEUROG1Q92886 237 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 TSACCQ96A04 125 aaPredicted RBP2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 NSL1Q96IY1 281 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 ZNF48Q96MX3 618 aaPredicted RBP2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 TSSK2Q96PF2 358 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 RUFY1Q96T51 708 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 MAP3K3Q99759 626 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 TUBA1CQ9BQE3 449 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 TMEM204Q9BSN7 226 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 TRIM7Q9C029 511 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 NAPBQ9H115 298 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 P2RY12Q9H244 342 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 C1orf21Q9H246 121 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 UBQLN3Q9H347 655 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 RIMS4Q9H426 269 aaPredicted RBP2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 CUEDC2Q9H467 287 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 PELI2Q9HAT8 420 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 RAB9BQ9NP90 201 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 CHST11Q9NPF2 352 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 FGF21Q9NSA1 209 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 PNPLA3Q9NST1 481 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 ECHDC1Q9NTX5 307 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 FETUBQ9UGM5 382 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 STUB1Q9UNE7 303 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 ITGB4P16144 1822 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 CHD4Q14839 1912 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 PLEKHG2Q9H7P9 1386 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 N4BP2Q86UW6 1770 aaPredicted RBP2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 MRC1P22897 1456 aa2.96□□□□□ -1.93
TRAPPC11-205ENST00000506426 COL5A3P25940 1745 aaPredicted RBP2.96□□□□□ -1.93
TRAPPC11-205ENST00000506426 IL16Q14005 1332 aa2.96□□□□□ -1.93
TRAPPC11-205ENST00000506426 KIF7Q2M1P5 1343 aa2.96□□□□□ -1.93
TRAPPC11-205ENST00000506426 TRAV18A0A075B6X5 111 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 LOC101059948A0A1B0GTJ6 334 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 C5orf51A6NDU8 294 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 C17orf105B2RV13 164 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 ERVV-2B6SEH9 535 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF197O14709 1029 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 XPNPEP2O43895 674 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 PRPSAP2O60256 369 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZBTB11O95625 1053 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 APOHP02749 345 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 FGF5P12034 268 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 CA4P22748 312 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 SFTPDP35247 375 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 CDKN2AP42771 156 aaKnown RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 MAGEB1P43366 347 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 NKX2-1P43699 371 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 OR3A1P47881 315 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 NR2C2P49116 596 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 FMO5P49326 533 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 PDLIM4P50479 330 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 LUMP51884 338 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 DVL1P1P54792 670 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 CASP9P55211 416 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 MAZP56270 477 aaKnown RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 DSCR9P59020 149 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 PITX1P78337 314 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 KIF5AQ12840 1032 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 TRAP1Q12931 704 aaKnown RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 TAF10Q12962 218 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 TAF13Q15543 124 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 UGP2Q16851 508 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 MTHFSDQ2M296 383 aaKnown RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 SLC35D3Q5M8T2 416 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 DCAF10Q5QP82 559 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 TTC27Q6P3X3 843 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF852Q6ZMS4 543 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 C1QL2Q7Z5L3 287 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF410Q86VK4 478 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 SERPINA12Q8IW75 414 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 HDDC3Q8N4P3 179 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 ANKRD20A12PQ8NF67 263 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 OR10Q1Q8NGQ4 319 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 LRRC8CQ8TDW0 803 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 SCRN2Q96FV2 425 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 DUX5Q96PT3 197 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 NAP1L3Q99457 506 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF559Q9BR84 538 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 NACAP1Q9BZK3 213 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 C10orf88Q9H8K7 445 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 RNF121Q9H920 327 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 MAGEF1Q9HAY2 307 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 PRMT8Q9NR22 394 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 SDR39U1Q9NRG7 319 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 GPR173Q9NS66 373 aa2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 NOCTQ9UK39 431 aaKnown RBP2.96□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF510Q9Y2H8 683 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms