RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, human

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42SE2-209	ENST00000506419	RAB8A	P61006	207 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	BTG2	P78543	158 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	CDKL1	Q00532	357 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	ZNF33B	Q06732	778 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	ACTN3	Q08043	901 aa	Predicted RBP	13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	ABRAXAS2	Q15018	415 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	RBBP5	Q15291	538 aa	Known RBP	13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	TRADD	Q15628	312 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	ACER2	Q5QJU3	275 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	ABHD17B	Q5VST6	288 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	FAM180A	Q6UWF9	173 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	SPATA4	Q8NEY3	305 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	PYROXD1	Q8WU10	500 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	TBC1D20	Q96BZ9	403 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	RHBDF1	Q96CC6	855 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	OR1F2P	Q96R84	312 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	SLC6A16	Q9GZN6	736 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	DPH5	Q9H2P9	285 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	RHOJ	Q9H4E5	214 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	CAB39L	Q9H9S4	337 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	SAYSD1	Q9NPB0	183 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	OLAH	Q9NV23	265 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	GRHL1	Q9NZI5	618 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	CTNNAL1	Q9UBT7	734 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	DYRK1B	Q9Y463	629 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	ITPR2	Q14571	2701 aa		13.54	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	PABPN1L	A6NDY0	278 aa	Known RBP	13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	FAM187A	A6NFU0	413 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	MAGEB17	A8MXT2	336 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	TAPBP	O15533	448 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	RAD51C	O43502	376 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	PRAMEF4	O60810	478 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	PRAMEF2	O60811	474 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	B4GALT2	O60909	372 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	STS	P08842	583 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	GMPR	P36959	345 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	CD96	P40200	585 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	SLC6A12	P48065	614 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	KCNC1	P48547	511 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	KCNK10	P57789	538 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	GPX6	P59796	221 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	PRAMEF9	Q5VWM5	478 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	CRYBG3	Q68DQ2	2970 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	ZNF787	Q6DD87	383 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	PAPD4	Q6PIY7	484 aa	Known RBP	13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	SLCO4C1	Q6ZQN7	724 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	CRLF3	Q8IUI8	442 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	KLHDC8A	Q8IYD2	350 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	BEST3	Q8N1M1	668 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	NR4A3	Q92570	626 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	VPS39	Q96JC1	886 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	ZNF354B	Q96LW1	612 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	AIF1L	Q9BQI0	150 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	KCNK13	Q9HB14	408 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	GPAM	Q9HCL2	828 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	MMP25	Q9NPA2	562 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	WHRN	Q9P202	907 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	KCNE2	Q9Y6J6	123 aa		13.53	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	SVIL	O95425	2214 aa		13.52	□□□□□ -0.24
CDC42SE2-209	ENST00000506419	TBX6	O95947	436 aa	Predicted RBP	13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	UQCRH	P07919	91 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	C1GALT1C1L	P0DN25	315 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	OR4D2	P58180	307 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	AP2B1	P63010	937 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	RGS1	Q08116	209 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	TUBA3C	Q13748	450 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	USP10	Q14694	798 aa	Known RBP	13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	FBXO48	Q5FWF7	155 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	TUBA3E	Q6PEY2	450 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	CYS1	Q717R9	158 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	TMPRSS11B	Q86T26	416 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	TBC1D19	Q8N5T2	526 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	BBOF1	Q8ND07	529 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	TRPV3	Q8NET8	790 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	ELP5	Q8TE02	316 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	ESAM	Q96AP7	390 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	PTCHD1	Q96NR3	888 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	SIGLEC12	Q96PQ1	595 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	EGFL8	Q99944	293 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	HES7	Q9BYE0	225 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	DERL2	Q9GZP9	239 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	POPDC3	Q9HBV1	291 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	NECTIN3	Q9NQS3	549 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	ANKRD10	Q9NXR5	420 aa		13.52	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	NCF1B	A6NI72	391 aa	Predicted RBP	13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	FAM159B	A6NKW6	160 aa		13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	NCF1C	A8MVU1	366 aa	Predicted RBP	13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	PHGDH	O43175	533 aa	Known RBP	13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	WDR47	O94967	919 aa		13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	RASAL1	O95294	804 aa		13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	SERPINA6	P08185	405 aa		13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	NCF1	P14598	390 aa	Predicted RBP	13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	HNMT	P50135	292 aa		13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	SLC26A5	P58743	744 aa		13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	PMP22	Q01453	160 aa		13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	POU4F1	Q01851	419 aa		13.51	□□□□□ -0.25
CDC42SE2-209	ENST00000506419	C2orf54	Q08AI8	447 aa		13.51	□□□□□ -0.25

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