RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 PRKAR1AP10644 381 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 RNH1P13489 461 aaKnown RBP9.35□□□□□ -0.91
NR1I3-220ENST00000505005 PPP2R1BP30154 601 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 TLX1P31314 330 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-220ENST00000505005 CRHR1P34998 444 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 HSD17B3P37058 310 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 ARL1P40616 181 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-220ENST00000505005 GLRBP48167 497 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 POLE2P56282 527 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 IFT88Q13099 833 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 KCNAB2Q13303 367 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 SLBPQ14493 270 aaKnown RBP eCLIP9.35□□□□□ -0.91
NR1I3-220ENST00000505005 AP5B1Q2VPB7 878 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 FAM153CQ494X1 144 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 GGTA1PQ4G0N0 100 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 CATSPEREQ5SY80 951 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 JMJD6Q6NYC1 403 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-220ENST00000505005 PAGE2Q7Z2X7 111 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 VN1R4Q7Z5H5 301 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 LAS2Q8IYD9 372 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 SPATA6LQ8N4H0 392 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 AFAP1L2Q8N4X5 818 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 TEX9Q8N6V9 391 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 PLPP5Q8NEB5 264 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 OR2L5Q8NG80 312 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 C9orf43Q8TAL5 461 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-220ENST00000505005 EXT2Q93063 718 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 GPR78Q96P69 363 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 SERINC2Q96SA4 455 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 SMC6Q96SB8 1091 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 NRTNQ99748 197 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 SLC6A16Q9GZN6 736 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 REXO4Q9GZR2 422 aaKnown RBP9.35□□□□□ -0.91
NR1I3-220ENST00000505005 ING2Q9H160 280 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 IPPKQ9H8X2 491 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 ANAPC2Q9UJX6 822 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 MMACHCQ9Y4U1 282 aa9.35□□□□□ -0.91
NR1I3-220ENST00000505005 PKD1L2Q7Z442 2459 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 FRYQ5TBA9 3013 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 A0A0A6YYC8 382 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-220ENST00000505005 A0A1W2PQ72 361 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 FEZF1A0PJY2 475 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 I3L1I5 382 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-220ENST00000505005 LCMT2O60294 686 aaKnown RBP9.34□□□□□ -0.91
NR1I3-220ENST00000505005 GALR3O60755 368 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-220ENST00000505005 DPM1O60762 260 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 KLHL18O94889 574 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 HPP00738 406 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 KRT6AP02538 564 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 KRT6BP04259 564 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 MTHFD2P13995 350 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 HSD3B1P14060 373 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 ACPPP15309 386 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 IMPDH1P20839 514 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 F8A1P23610 371 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 HSD3B2P26439 372 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 OTX2P32243 289 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 GDF5P43026 501 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 GSTM5P46439 218 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 OR1D4P47884 311 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 KRT6CP48668 564 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 MTTPP55157 894 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 PKNOX1P55347 436 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 HERVK_113P63132 956 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 CUL3Q13618 768 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 DOC2AQ14183 400 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 EXT1Q16394 746 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 HKDC1Q2TB90 917 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 ADPRMQ3LIE5 342 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 PRAMEF17Q5VTA0 474 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 TTC19Q6DKK2 380 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-220ENST00000505005 NDUFAF7Q7L592 441 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 MILR1Q7Z6M3 343 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 ZNF595Q8IYB9 648 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 L3MBTL4Q8NA19 623 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 OR51Q1Q8NH59 317 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 UHMK1Q8TAS1 419 aaKnown RBP9.34□□□□□ -0.91
NR1I3-220ENST00000505005 ADAMTS17Q8TE56 1095 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 CCT6BQ92526 530 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 RGMAQ96B86 450 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 TBC1D20Q96BZ9 403 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 C10orf90Q96M02 699 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 RUFY1Q96T51 708 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 SERPINI1Q99574 410 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 TMEM79Q9BSE2 394 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 TRMOQ9BU70 441 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 TUBB6Q9BUF5 446 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 SLC25A23Q9BV35 468 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 ERVK-6Q9BXR3 956 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 SHCBP1LQ9BZQ2 653 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 WDR41Q9HAD4 459 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 PRDM9Q9NQV7 894 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 STARD5Q9NSY2 213 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 MKS1Q9NXB0 559 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 XPR1Q9UBH6 696 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 TBK1Q9UHD2 729 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 C3orf18Q9UK00 162 aa9.34□□□□□ -0.91
NR1I3-220ENST00000505005 HEMK1Q9Y5R4 338 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-220ENST00000505005 KMT2BQ9UMN6 2715 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-220ENST00000505005 WDFY3Q8IZQ1 3526 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms