RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 KIF1CO43896 1103 aaKnown RBP9.91□□□□□ -0.82
TPM3-217ENST00000504663 TMPRSS11DO60235 418 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 HNRNPCL1O60812 293 aaKnown RBP9.91□□□□□ -0.82
TPM3-217ENST00000504663 SCN2BO60939 215 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 SLC22A3O75751 556 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 ATP5HO75947 161 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 SCELO95171 688 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 MED26O95402 600 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 SNRPB2P08579 225 aaKnown RBP9.91□□□□□ -0.82
TPM3-217ENST00000504663 THRAP10827 490 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 ESRRAP11474 423 aaPredicted RBP9.91□□□□□ -0.82
TPM3-217ENST00000504663 PRPS2P11908 318 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 GLB1P16278 677 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 ENGP17813 658 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 VAMP1P23763 118 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 CD1CP29017 333 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 WNT3P56703 355 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 CORO7P57737 925 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 STX1BP61266 288 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 RPS15AP62244 130 aaKnown RBP9.91□□□□□ -0.82
TPM3-217ENST00000504663 SLC25A3Q00325 362 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 PDE7AQ13946 482 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 CYLC2Q14093 348 aaPredicted RBP9.91□□□□□ -0.82
TPM3-217ENST00000504663 COQ5Q5HYK3 327 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 PAGE3Q5JUK9 113 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 SPANXN4Q5MJ08 99 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 NKAIN2Q5VXU1 208 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 MRM1Q6IN84 353 aaKnown RBP9.91□□□□□ -0.82
TPM3-217ENST00000504663 GUSBP11Q6P575 273 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 CAMKMTQ7Z624 323 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 ADCK2Q7Z695 626 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 SPRED1Q7Z699 444 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 OR4N4Q8N0Y3 316 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 SHISA5Q8N114 240 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 DNAJC22Q8N4W6 341 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 C19orf47Q8N9M1 422 aaKnown RBP9.91□□□□□ -0.82
TPM3-217ENST00000504663 TTLQ8NG68 377 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 TSPEARQ8WU66 669 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 KLHL6Q8WZ60 621 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 ZUFSPQ96AP4 578 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 CCDC74AQ96AQ1 378 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 MS4A6EQ96DS6 147 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 CMTM5Q96DZ9 223 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 QRFPRQ96P65 431 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 TSSK3Q96PN8 268 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 MAP3K3Q99759 626 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 TUBB6Q9BUF5 446 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 CHRNA10Q9GZZ6 450 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 SERHLQ9NQF3 203 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 PRDM7Q9NQW5 492 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 ENAMQ9NRM1 1142 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 MRGBPQ9NV56 204 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 TMEM9Q9P0T7 183 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 LRIT1Q9P2V4 623 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 MCM8Q9UJA3 840 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 ERVK-11Q9UQG0 969 aa9.91□□□□□ -0.82
TPM3-217ENST00000504663 EIF3LQ9Y262 564 aaKnown RBP9.91□□□□□ -0.82
TPM3-217ENST00000504663 RUVBL1Q9Y265 456 aaKnown RBP9.91□□□□□ -0.82
TPM3-217ENST00000504663 MRPS2Q9Y399 296 aaKnown RBP9.91□□□□□ -0.82
TPM3-217ENST00000504663 OTOGLQ3ZCN5 2332 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 TRBV5-3A0A0A0MS03 114 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 IGHV5-51A0A0C4DH38 117 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 A0A0J9YVX5 310 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 A0A1W2PQM1 296 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 LNP1A1A4G5 178 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 NR5A2O00482 541 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 GSC2O15499 205 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 ZW10O43264 779 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 PCDH7O60245 1069 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 DFNA5O60443 496 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 CER1O95813 267 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 GBAP04062 536 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 KRT16P08779 473 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 PNLIPP16233 465 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 PTX3P26022 381 aaPredicted RBP9.9□□□□□ -0.82
TPM3-217ENST00000504663 PTPN6P29350 595 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 GPR3P46089 330 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 GCGRP47871 477 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 POLR2JP52435 117 aaKnown RBP9.9□□□□□ -0.82
TPM3-217ENST00000504663 DGKQP52824 942 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 ACSM2AQ08AH3 577 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 SQSTM1Q13501 440 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 MAPRE2Q15555 327 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 MPEG1Q2M385 716 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 VPS26BQ4G0F5 336 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 TIGD2Q4W5G0 525 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 ZNF385BQ569K4 471 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 ACSM2BQ68CK6 577 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 FAM71E1Q6IPT2 247 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 ABHD17CQ6PCB6 329 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 PGM2L1Q6PCE3 622 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 HACD2Q6Y1H2 254 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 MSRB3Q8IXL7 192 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 MMP21Q8N119 569 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 MINDY1Q8N5J2 469 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 VPS33AQ96AX1 596 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 TESCQ96BS2 214 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 SPDL1Q96EA4 605 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 THAP11Q96EK4 314 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 SLC38A3Q99624 504 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms