RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SPATA13Q96N96 652 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 AMDHD1Q96NU7 426 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 FYTTD1Q96QD9 318 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CPXM1Q96SM3 734 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CYP2S1Q96SQ9 504 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SEMA3CQ99985 751 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 APOL4Q9BPW4 351 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CEP250Q9BV73 2442 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 HDHD5Q9BXW7 423 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SEMA4CQ9C0C4 833 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 OPN3Q9H1Y3 402 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM138Q9NPI0 162 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MORF4L1Q9UBU8 362 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TBC1D24Q9ULP9 559 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 RAB26Q9ULW5 256 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ANGPT4Q9Y264 503 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SNX10Q9Y5X0 201 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ABCA1O95477 2261 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 COL11A1P12107 1806 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 IGKV6D-41A0A0C4DH26 115 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SMIM30A4D0T7 59 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 A8MXK9 166 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 C22orf46C9J442 243 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR25O00155 361 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CES2O00748 559 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SCAMP1O15126 338 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MDM4O15151 490 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SMAD6O43541 496 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 KCNH1O95259 989 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 NUDT14O95848 222 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MPOP05164 745 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 BPGMP07738 259 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MAPTP10636 758 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CNTFP26441 200 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR15P49685 360 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ARL4DP49703 201 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 WNT7BP56706 349 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 STARD6P59095 220 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 GAD2Q05329 585 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 IL18R1Q13478 541 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SAPCD1Q5SSQ6 148 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SH3PXD2AQ5TCZ1 1133 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MEDAGQ5VYS4 303 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 STEAP3Q658P3 488 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 VASNQ6EMK4 673 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 DESI1Q6ICB0 168 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 RPUSD3Q6P087 351 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CRTC3Q6UUV7 619 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 NAPRTQ6XQN6 538 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 LBX2Q6XYB7 198 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 COMMD2Q86X83 199 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PSTKQ8IV42 348 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MAP4K3Q8IVH8 894 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CFAP52Q8N1V2 620 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 IL17RCQ8NAC3 791 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 C11orf65Q8NCR3 313 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM161BQ8NDZ6 487 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 NANPQ8TBE9 248 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ZFAND1Q8TCF1 268 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 WNT8BQ93098 351 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CHCHD6Q9BRQ6 235 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 UGT2B28Q9BY64 529 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MMP27Q9H306 513 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CXorf21Q9HAI6 301 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SPAG4Q9NPE6 437 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 DIABLOQ9NR28 239 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CCM2LQ9NUG4 571 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MCUBQ9NWR8 336 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 OPTCQ9UBM4 332 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 RAB23Q9ULC3 237 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 GABRQQ9UN88 632 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 KLK4Q9Y5K2 254 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 NCOR1O75376 2440 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 XIRP2A4UGR9 3374 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM191CA6NGB0 347 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM74A7A6NL05 159 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CPSF4LA6NMK7 179 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 E7ENX8 843 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TRIM38O00635 465 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TBX1O43435 398 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 GMDSO60547 372 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CLPXO76031 633 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 IPO13O94829 963 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 DNTTP04053 509 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SERPINA6P08185 405 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PSKH1P11801 424 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ODC1P11926 461 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CSF2RAP15509 400 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MYL12AP19105 171 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 RAB3AP20336 220 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MSH3P20585 1137 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ATP5F1P24539 256 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ITGA3P26006 1051 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 LIPAP38571 399 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 GNPDA1P46926 289 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 KCNC1P48547 511 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PGGT1BP53609 377 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 DRG2P55039 364 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 IL2P60568 153 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PPP2CBP62714 309 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms