RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ASZ1Q8WWH4 475 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 SYN2Q92777 582 aaPredicted RBP11.59□□□□□ -0.55
LSM6-204ENST00000504181 PIK3IP1Q96FE7 263 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 CCDC138Q96M89 665 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 WDR83Q9BRX9 315 aaKnown RBP11.59□□□□□ -0.55
LSM6-204ENST00000504181 RBM24Q9BX46 236 aaKnown RBP11.59□□□□□ -0.55
LSM6-204ENST00000504181 REG4Q9BYZ8 158 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 NLE1Q9NVX2 485 aaPredicted RBP11.59□□□□□ -0.55
LSM6-204ENST00000504181 GALNT8Q9NY28 637 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 TTC7AQ9ULT0 858 aaPredicted RBP11.59□□□□□ -0.55
LSM6-204ENST00000504181 MYO6Q9UM54 1294 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 IQCF5A8MTL0 148 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 ZNF487B1APH4 448 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 HCN1O60741 890 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 PROSCO94903 275 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 EPPINO95925 133 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 APOA4P06727 396 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 PECAM1P16284 738 aaPredicted RBP11.58□□□□□ -0.56
LSM6-204ENST00000504181 RPA3P35244 121 aaPredicted RBP11.58□□□□□ -0.56
LSM6-204ENST00000504181 TIMP3P35625 211 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 DNASE1L1P49184 302 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 ATP5J2P56134 94 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 CLEC12BQ2HXU8 276 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 PDSS2Q86YH6 399 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 LACC1Q8IV20 430 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 NFAM1Q8NET5 270 aaPredicted RBP11.58□□□□□ -0.56
LSM6-204ENST00000504181 SKA2Q8WVK7 121 aaPredicted RBP11.58□□□□□ -0.56
LSM6-204ENST00000504181 ZBED6CLQ96FA7 236 aaPredicted RBP11.58□□□□□ -0.56
LSM6-204ENST00000504181 CDKN2AIPNLQ96HQ2 116 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 C19orf43Q9BQ61 176 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 FAM173AQ9BQD7 235 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 PIGQQ9BRB3 760 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 LIN28AQ9H9Z2 209 aaKnown RBP11.58□□□□□ -0.56
LSM6-204ENST00000504181 ANKHQ9HCJ1 492 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 TUBA8Q9NY65 449 aaPredicted RBP11.58□□□□□ -0.56
LSM6-204ENST00000504181 JKAMPQ9P055 326 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 TAC3Q9UHF0 121 aa11.58□□□□□ -0.56
LSM6-204ENST00000504181 FREM1Q5H8C1 2179 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 MALRD1Q5VYJ5 2156 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 DEFB108AA8MXU0 73 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 ANXA9O76027 345 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 OR6B1O95007 311 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 CNR1P21554 472 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 MSNP26038 577 aaKnown RBP11.57□□□□□ -0.56
LSM6-204ENST00000504181 CPA2P48052 419 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 CLCN2P51788 898 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 HYAL4Q2M3T9 481 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 ZNF750Q32MQ0 723 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 CT47A1Q5JQC4 288 aaPredicted RBP11.57□□□□□ -0.56
LSM6-204ENST00000504181 ICE2Q659A1 982 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 KCTD11Q693B1 232 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 FAM47EQ6ZV65 393 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 LUZP2Q86TE4 346 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.57□□□□□ -0.56
LSM6-204ENST00000504181 KRT222Q8N1A0 295 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 APCDD1LQ8NCL9 501 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 OR5T3Q8NGG3 340 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 ASB15Q8WXK1 588 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 PTCHD1Q96NR3 888 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 OR1F2PQ96R84 312 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 VAT1Q99536 393 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 GBA3Q9H227 469 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 SLC6A15Q9H2J7 730 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 ABCF3Q9NUQ8 709 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 UTP6Q9NYH9 597 aaKnown RBP11.57□□□□□ -0.56
LSM6-204ENST00000504181 SPATA7Q9P0W8 599 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 TSR3Q9UJK0 312 aaKnown RBP11.57□□□□□ -0.56
LSM6-204ENST00000504181 YARS2Q9Y2Z4 477 aaKnown RBP11.57□□□□□ -0.56
LSM6-204ENST00000504181 TESMINQ9Y4I5 508 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 PCDHGB3Q9Y5G1 929 aa11.57□□□□□ -0.56
LSM6-204ENST00000504181 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.57□□□□□ -0.56
LSM6-204ENST00000504181 B4GALT2O60909 372 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 OR2J2O76002 312 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 KRT1P04264 644 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 FHP07954 510 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 CTSSP25774 331 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 CYLC1P35663 651 aaPredicted RBP11.56□□□□□ -0.56
LSM6-204ENST00000504181 SOX3P41225 446 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 ADARP55265 1226 aaKnown RBP11.56□□□□□ -0.56
LSM6-204ENST00000504181 FOXO1Q12778 655 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 DENND5AQ6IQ26 1287 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 TMEM214Q6NUQ4 689 aaKnown RBP11.56□□□□□ -0.56
LSM6-204ENST00000504181 PLEKHM3Q6ZWE6 761 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 VN1R4Q7Z5H5 301 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 TMEM171Q8WVE6 324 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 SREK1Q8WXA9 508 aaKnown RBP11.56□□□□□ -0.56
LSM6-204ENST00000504181 HSPBAP1Q96EW2 488 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 BEX2Q9BXY8 128 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 SEMA4BQ9NPR2 832 aaPredicted RBP11.56□□□□□ -0.56
LSM6-204ENST00000504181 RYDENQ9NUL5 291 aaKnown RBP11.56□□□□□ -0.56
LSM6-204ENST00000504181 NDRG3Q9UGV2 375 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 ZNF223Q9UK11 482 aaPredicted RBP11.56□□□□□ -0.56
LSM6-204ENST00000504181 R3HDM2Q9Y2K5 976 aaKnown RBP11.56□□□□□ -0.56
LSM6-204ENST00000504181 NAALAD2Q9Y3Q0 740 aa11.56□□□□□ -0.56
LSM6-204ENST00000504181 F8W8V4 182 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 CTIFO43310 598 aaKnown RBP11.55□□□□□ -0.56
LSM6-204ENST00000504181 PRKNO60260 465 aaPredicted RBP11.55□□□□□ -0.56
LSM6-204ENST00000504181 ERN1O75460 977 aaKnown RBP11.55□□□□□ -0.56
LSM6-204ENST00000504181 PAX1P15863 534 aa11.55□□□□□ -0.56
LSM6-204ENST00000504181 AOAHP28039 575 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms