RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 PRORSD1PA6NEY8 169 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 F8W036 122 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 INMT-MINDY4F8WBC2 141 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SDHDO14521 159 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CLIC2O15247 247 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ADAM12O43184 909 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SSX5O60225 188 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SS18L1O75177 396 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 LRIG2O94898 1065 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CALCAP01258 141 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ALPPP05187 535 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 NR2F6P10588 404 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TFE3P19532 575 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 OGNP20774 298 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 GJC1P36383 396 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ADH7P40394 386 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SEPHS1P49903 392 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CDH6P55285 790 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 RRAS2P62070 204 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PCLAFQ15004 111 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 NCF4Q15080 339 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PON2Q15165 354 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 MRM1Q6IN84 353 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 NSMFQ6X4W1 530 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CCDC190Q86UF4 302 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CLIP4Q8N3C7 705 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 C12orf29Q8N999 325 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CLRN3Q8NCR9 226 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 LPCAT1Q8NF37 534 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PCDH19Q8TAB3 1148 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SNIP1Q8TAD8 396 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ACOT12Q8WYK0 555 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 COPS5Q92905 334 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PHF21AQ96BD5 680 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SENP8Q96LD8 212 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 C10orf90Q96M02 699 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SPATA9Q9BWV2 254 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZYG11BQ9C0D3 744 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PRDM12Q9H4Q4 367 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TUT1Q9H6E5 874 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SCUBE2Q9NQ36 999 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 IMPAD1Q9NX62 359 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 IL17CQ9P0M4 197 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 STOX2Q9P2F5 926 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 RPS6KA6Q9UK32 745 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 INTS6Q9UL03 887 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 RNF6Q9Y252 685 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 OAS3Q9Y6K5 1087 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PDZD2O15018 2839 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 OR6C70A6NIJ9 312 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 M0R233 179 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 GPX5O75715 221 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 IL1AP01583 271 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ALPLP05186 524 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CD58P19256 250 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CHMP24386 653 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ADORA2AP29274 412 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ASMTP46597 345 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TGM4P49221 684 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF140P52738 457 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 AP1S1P61966 158 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 IL5RAQ01344 420 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 RELQ04864 619 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PUDPQ08623 228 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 KIF19Q2TAC6 998 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PCID2Q5JVF3 399 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ATAD3CQ5T2N8 411 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF385CQ66K41 422 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 EIF5AL1Q6IS14 154 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 KLHL24Q6TFL4 600 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 HID1Q8IV36 788 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 NAXDQ8IW45 347 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ADGRF3Q8IZF5 1079 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SLC38A6Q8IZM9 456 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 OR8H2Q8N162 312 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 KCTD6Q8NC69 237 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SLC9A6Q92581 669 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SLC25A36Q96CQ1 311 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 DMRTB1Q96MA1 342 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SERPINB11Q96P15 392 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TRIM62Q9BVG3 475 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF436Q9C0F3 470 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ELOVL4Q9GZR5 314 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 QRSL1Q9H0R6 528 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ALG2Q9H553 416 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 EMC7Q9NPA0 242 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TAS2R14Q9NYV8 317 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CALML5Q9NZT1 146 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 AASSQ9UDR5 926 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PRKAG2Q9UGJ0 569 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF225Q9UK10 706 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ELF5Q9UKW6 265 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PNMA8BQ9ULN7 279 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 DIMT1Q9UNQ2 313 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SAMD4AQ9UPU9 718 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ATP6V1G2-DDX39BF2Z307 99 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TSPAN4O14817 238 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 BCKDKO14874 412 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 AKAP8O43823 692 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms