RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 EPHA6Q9UF33 1036 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 GMEB2Q9UKD1 530 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 AURKCQ9UQB9 309 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRAV18A0A075B6X5 111 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 A0A087WW49 117 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 RGSL1A5PLK6 1076 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 MSGN1A6NI15 193 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMEM150CB9EJG8 249 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 KBTBD13C9JR72 458 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 PALMO75781 387 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 BCAS2O75934 225 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRIM16O95361 564 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 TBX6O95947 436 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 RAF1P04049 648 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 ATP1B1P05026 303 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 SP9P0CG40 484 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC2A2P11168 524 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 ARF4P18085 180 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 CCND3P30281 292 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 DUTP33316 252 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 ACAA2P42765 397 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC26A5P58743 744 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 GMFBP60983 142 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 SNRPD1P62314 119 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 MYL7Q01449 175 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 PMP22Q01453 160 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 HNRNPDQ14103 355 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 RPS6KA1Q15418 735 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 TEAD2Q15562 447 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC1A5Q15758 541 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 C12orf60Q5U649 245 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 FAM46CQ5VWP2 391 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 ARHGAP17Q68EM7 881 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 ARHGAP11AQ6P4F7 1023 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 PSRC1Q6PGN9 363 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC25A47Q6Q0C1 308 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMEM270Q6UE05 265 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRSS55Q6UWB4 352 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 OLFM4Q6UX06 510 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 CCDC73Q6ZRK6 1079 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 MIER3Q7Z3K6 550 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 PTAR1Q7Z6K3 402 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZER1Q7Z7L7 766 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 LACC1Q8IV20 430 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 CLYBLQ8N0X4 340 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 LYG1Q8N1E2 194 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 RAB42Q8N4Z0 105 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 GBP7Q8N8V2 638 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 CNNM3Q8NE01 707 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 DDHD1Q8NEL9 900 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 LPCAT1Q8NF37 534 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 IPMKQ8NFU5 416 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR7G3Q8NG95 312 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR4C15Q8NGM1 316 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 FAM76AQ8TAV0 307 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 CCDC110Q8TBZ0 833 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 APOBEC4Q8WW27 367 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC13A3Q8WWT9 602 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 EEF2KMTQ96G04 330 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 RBM18Q96H35 190 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 MAGED4Q96JG8 741 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 LRR1Q96L50 414 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 C10orf90Q96M02 699 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 NECTIN4Q96NY8 510 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 GAL3ST4Q96RP7 486 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 RUFY1Q96T51 708 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 CDCA3Q99618 268 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 LPAR4Q99677 370 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 HNRNPABQ99729 332 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 NKX3-1Q99801 234 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 FUCA2Q9BTY2 467 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 LSG1Q9H089 658 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 NT5C3AQ9H0P0 336 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 P2RY12Q9H244 342 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF696Q9H7X3 374 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMEM206Q9H813 350 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 RAVER2Q9HCJ3 691 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 TUFT1Q9NNX1 390 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 SCRT2Q9NQ03 307 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 POLE3Q9NRF9 147 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 IARS2Q9NSE4 1012 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 DNAJC17Q9NVM6 304 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 CNIH4Q9P003 139 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRPC4Q9UBN4 977 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 EXTL2Q9UBQ6 330 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 MRPS28Q9Y2Q9 187 aaKnown RBP2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 KLK4Q9Y5K2 254 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 IL16Q14005 1332 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 ATAD2BQ9ULI0 1458 aa2.14□□□□□ -2.07
HMGB1P35-201ENST00000503360 DISP3Q9P2K9 1392 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRBV4-1A0A0J9YWV2 114 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 SYCE3A1L190 88 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC9B1P1A6NJY1 282 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 E5RGE8 158 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 H3BMM5 538 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 K7EPI3 171 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF195O14628 629 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 MCF2LO15068 1137 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 CTDSPLO15194 276 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms