RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 BCORP1Q8N888 145 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 PLPP5Q8NEB5 264 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 NT5CQ8TCD5 201 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 VPS39Q96JC1 886 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 FAM129AQ9BZQ8 928 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 RHOJQ9H4E5 214 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 OLAHQ9NV23 265 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 ZFP69BQ9UJL9 534 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 CPAMD8Q8IZJ3 1885 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 CACNA1DQ01668 2161 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 FAM227AF5H4B4 570 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 RAD51CO43502 376 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 B4GALT2O60909 372 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 TDGF1P3P51864 188 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 BTG2P78543 158 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 PMP22Q01453 160 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 C2orf54Q08AI8 447 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 CBLBQ13191 982 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 RBBP5Q15291 538 aaKnown RBP15.29■□□□□ 0.04
SCLT1-204ENST00000503215 TRADDQ15628 312 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 FBXO48Q5FWF7 155 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 CROCCQ5TZA2 2017 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 H3F3CQ6NXT2 135 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 PAPD4Q6PIY7 484 aaKnown RBP15.29■□□□□ 0.04
SCLT1-204ENST00000503215 MAMDC2Q7Z304 686 aaPredicted RBP15.29■□□□□ 0.04
SCLT1-204ENST00000503215 BEST3Q8N1M1 668 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 NKAPQ8N5F7 415 aaKnown RBP15.29■□□□□ 0.04
SCLT1-204ENST00000503215 CREB3L4Q8TEY5 395 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 TBC1D20Q96BZ9 403 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 TEX15Q9BXT5 2789 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 SAYSD1Q9NPB0 183 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 ANKRD10Q9NXR5 420 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 GRHL1Q9NZI5 618 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 C19orf25Q9UFG5 118 aaPredicted RBP15.29■□□□□ 0.04
SCLT1-204ENST00000503215 DYRK1BQ9Y463 629 aa15.29■□□□□ 0.04
SCLT1-204ENST00000503215 OR5H15A6NDH6 313 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 PHGDHO43175 533 aaKnown RBP15.28■□□□□ 0.04
SCLT1-204ENST00000503215 PRAMEF4O60810 478 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 FHP07954 510 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 SMIM10L1P0DMW3 83 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 AHRP35869 848 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 ACTN3Q08043 901 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-204ENST00000503215 RGS1Q08116 209 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 ACER2Q5QJU3 275 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 PRAMEF9Q5VWM5 478 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 CRLF3Q8IUI8 442 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 KIF2BQ8N4N8 673 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 SPATA4Q8NEY3 305 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 PYROXD1Q8WU10 500 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 ANKRD7Q92527 254 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 NR4A3Q92570 626 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 RHBDF1Q96CC6 855 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 SMIM10Q96HG1 83 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 SIGLEC12Q96PQ1 595 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 OR1F2PQ96R84 312 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 EGFL8Q99944 293 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 ERP44Q9BS26 406 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 HES7Q9BYE0 225 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 SLC6A16Q9GZN6 736 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 RNF32Q9H0A6 362 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 PELI2Q9HAT8 420 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 KCNK13Q9HB14 408 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 GPAMQ9HCL2 828 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 CTNNAL1Q9UBT7 734 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 OARD1Q9Y530 152 aa15.28■□□□□ 0.04
SCLT1-204ENST00000503215 A0A0G2JN53 185 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 NCF1BA6NI72 391 aaPredicted RBP15.27■□□□□ 0.04
SCLT1-204ENST00000503215 NCF1CA8MVU1 366 aaPredicted RBP15.27■□□□□ 0.04
SCLT1-204ENST00000503215 MAGEB17A8MXT2 336 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 TAPBPO15533 448 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 PRAMEF2O60811 474 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 C1QAP02745 245 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 CYC1P08574 325 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 NCF1P14598 390 aaPredicted RBP15.27■□□□□ 0.04
SCLT1-204ENST00000503215 SLC6A12P48065 614 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 AGTR2P50052 363 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 OR4D2P58180 307 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 GPX6P59796 221 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 CDKL1Q00532 357 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 USP10Q14694 798 aaKnown RBP15.27■□□□□ 0.04
SCLT1-204ENST00000503215 TOR1AIP1Q5JTV8 583 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 MYO7BQ6PIF6 2116 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 SLCO4C1Q6ZQN7 724 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 ESAMQ96AP7 390 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 AIF1LQ9BQI0 150 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 RHBGQ9H310 441 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 MMP25Q9NPA2 562 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 RNF14Q9UBS8 474 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 KCNE2Q9Y6J6 123 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 CENPEQ02224 2701 aa15.27■□□□□ 0.04
SCLT1-204ENST00000503215 TCRBV9S1A1TA0A576 114 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 FAM187AA6NFU0 413 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 FAM155BO75949 473 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 WDR47O94967 919 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 MAOAP21397 527 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 IL10P22301 178 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 CD96P40200 585 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 KCNC1P48547 511 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 SLC26A5P58743 744 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 TUBA3CQ13748 450 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms