RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 PFKMP08237 780 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 HNRNPCL4P0DMR1 293 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 SAGP10523 405 aaPredicted RBP16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 RAET1GQ6H3X3 334 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 DHRS4L2Q6PKH6 230 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 CACUL1Q86Y37 369 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 SPAG16Q8N0X2 631 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 NETO1Q8TDF5 533 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 RFT1Q96AA3 541 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 SLC35G5Q96KT7 338 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 BTBD1Q9H0C5 482 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 TNFRSF10DQ9UBN6 386 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 ITGB4P16144 1822 aa16.64■□□□□ 0.26
HMGXB3-201ENST00000502717 SOX14O95416 240 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 ALDOCP09972 364 aaKnown RBP16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 NOXRED1Q6NXP6 359 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 PARP16Q8N5Y8 322 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 FUBP1Q96AE4 644 aaKnown RBP16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 SNX18Q96RF0 628 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 PDCD5O14737 125 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 RBBP4Q09028 425 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 HSD17B12Q53GQ0 312 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 ZNF789Q5FWF6 425 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 MS4A13Q5J8X5 152 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 PEG10Q86TG7 708 aaKnown RBP16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 PLCZ1Q86YW0 608 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 CADM3Q8N126 398 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 TMIEQ8NEW7 156 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 SHKBP1Q8TBC3 707 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 C1QTNF1Q9BXJ1 281 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 NPAP1Q9NZP6 1156 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 UPB1Q9UBR1 384 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 SOBPA7XYQ1 873 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 A8MU76 341 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 FAM25EA8MYX2 175 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 CRISP1P54107 249 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 EXOC3L2Q2M3D2 409 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 METTL4Q8N3J2 472 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 SIMC1Q8NDZ2 872 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 OR8J1Q8NGP2 316 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 SLC22A17Q8WUG5 538 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 PCDHA9Q9Y5H5 950 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 MEIOCA2RUB1 952 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 BEST1O76090 585 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 DGKEP52429 567 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 PPP2R2BQ00005 443 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 PTCHD3Q3KNS1 767 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 PIAS4Q8N2W9 510 aaPredicted RBP16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 SRFBP1Q8NEF9 429 aaKnown RBP16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 ADAMTS16Q8TE57 1224 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 PLD4Q96BZ4 506 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 TXNDC15Q96J42 360 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 TRIB3Q96RU7 358 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 PIP5K1AQ99755 562 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 EFCAB11Q9BUY7 163 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 MKRN2Q9H000 416 aaKnown RBP16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 PCDHGB1Q9Y5G3 927 aa16.64■□□□□ 0.25
HMGXB3-201ENST00000502717 SMIM30A4D0T7 59 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 OR2AG2A6NM03 316 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 FAM155AB1AL88 458 aaPredicted RBP16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 HCN1O60741 890 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 DSG2Q14126 1118 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 SELPLGQ14242 412 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 MSANTD1Q6ZTZ1 278 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 LACC1Q8IV20 430 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 PELI3Q8N2H9 469 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 CPA6Q8N4T0 437 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 CYP2S1Q96SQ9 504 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 EXTL2Q9UBQ6 330 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 ZNF451Q9Y4E5 1061 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 OR1E2P47887 323 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 ATP13A5Q4VNC0 1218 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 OLFML2AQ68BL7 652 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 ZNF598Q86UK7 904 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 DUS3LQ96G46 650 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 VMP1Q96GC9 406 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 LMAN2LQ9H0V9 348 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 GABARAPO95166 117 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 LAMP2P13473 410 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 ERVPABLB-1P60509 514 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 TLE2Q04725 743 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 ATXN7L2Q5T6C5 722 aaPredicted RBP16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 C14orf80Q86SX3 495 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 TIGD4Q8IY51 512 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 OR5AK3PQ8NH89 298 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 MGME1Q9BQP7 344 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 TRAV6A0A075B6T7 132 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 F8A1P23610 371 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 KHKP50053 298 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 CDH11P55287 796 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 GHRHRQ02643 423 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 SLC36A4Q6YBV0 504 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 CLDN19Q8N6F1 224 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 PIGKQ92643 395 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 PPIL3Q9H2H8 161 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 OARD1Q9Y530 152 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 PCDHB11Q9Y5F2 797 aa16.63■□□□□ 0.25
HMGXB3-201ENST00000502717 CACNA1SQ13698 1873 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 ZNF879B4DU55 563 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms