RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 GCAP28676 217 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 TNFRSF8P28908 595 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 XCR1P46094 333 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 SOX8P57073 446 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 HYAL2Q12891 473 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 RAPSNQ13702 412 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 SETDB1Q15047 1291 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 TBCCQ15814 346 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 MINDY4Q4G0A6 757 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 TECRLQ5HYJ1 363 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 TOR1AIP1Q5JTV8 583 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 IRAK1BP1Q5VVH5 260 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 PRAMEF9Q5VWM5 478 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 TIFABQ6ZNK6 161 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 PRICKLE2Q7Z3G6 844 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 ZC3H7AQ8IWR0 971 aaKnown RBP12.11□□□□□ -0.47
HSPG2-213ENST00000498495 PARP9Q8IXQ6 854 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.11□□□□□ -0.47
HSPG2-213ENST00000498495 CNPY4Q8N129 248 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 AFAP1L2Q8N4X5 818 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 TEX9Q8N6V9 391 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 OR11G2Q8NGC1 345 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 UBTD2Q8WUN7 234 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 UBE2E3Q969T4 207 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 C8orf44Q96CB5 159 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 WDR34Q96EX3 536 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 PEX11GQ96HA9 241 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 SMIM10Q96HG1 83 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 FAR2Q96K12 515 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 NUDT9Q9BW91 350 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 SLC6A16Q9GZN6 736 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 KLHL31Q9H511 634 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 ANKZF1Q9H8Y5 726 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 MLXIPLQ9NP71 852 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 COPG2Q9UBF2 871 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 FBXL4Q9UKA2 621 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 ZNF490Q9ULM2 529 aaPredicted RBP12.11□□□□□ -0.47
HSPG2-213ENST00000498495 TMCO1Q9UM00 188 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 ZNF451Q9Y4E5 1061 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 PCDHGB7Q9Y5F8 929 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 SCN3AQ9NY46 2000 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 LRIT2A6NDA9 550 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 PCDH17O14917 1159 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 SUV39H1O43463 412 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 CHST10O43529 356 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 SLC28A2O43868 658 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 SMIM24O75264 130 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 ALOX12BO75342 701 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 JRKO75564 520 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 WFS1O76024 890 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 B3GALT4O96024 378 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 PDGFAP04085 211 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 EPORP19235 508 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 ITGA3P26006 1051 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 HPDP32754 393 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-213ENST00000498495 CASP2P42575 452 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 OLR1P78380 273 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 KLRB1Q12918 225 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 NAA30Q147X3 362 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-213ENST00000498495 PCBP2Q15366 365 aaKnown RBP eCLIP12.1□□□□□ -0.47
HSPG2-213ENST00000498495 MED27Q6P2C8 311 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 ATG14Q6ZNE5 492 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 NDUFAF7Q7L592 441 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 OR5T3Q8NGG3 340 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 PHF21BQ96EK2 531 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 MRPL57Q9BQC6 102 aaKnown RBP12.1□□□□□ -0.47
HSPG2-213ENST00000498495 EPB41L4BQ9H329 900 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 CLK4Q9HAZ1 481 aaKnown RBP12.1□□□□□ -0.47
HSPG2-213ENST00000498495 PSMC3IPQ9P2W1 217 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-213ENST00000498495 XPR1Q9UBH6 696 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 TBK1Q9UHD2 729 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 ANAPC2Q9UJX6 822 aa12.1□□□□□ -0.47
HSPG2-213ENST00000498495 IGSF10Q6WRI0 2623 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 NSG1A0A0A6YYJ2 146 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 DNAJB6O75190 326 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 HPP00738 406 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 ALPPP05187 535 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 C8orf89P0DMQ9 161 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 PCNAP12004 261 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 CD22P20273 847 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 PIK3CGP48736 1102 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 BTN3A2P78410 334 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 EEF1A2Q05639 463 aaKnown RBP12.09□□□□□ -0.47
HSPG2-213ENST00000498495 PCDH1Q08174 1060 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 TGM3Q08188 693 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 GTF2H2Q13888 395 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 MYBPC3Q14896 1274 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 LIPJQ5W064 366 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 GTF2H2CQ6P1K8 395 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 METTL2BQ6P1Q9 378 aaKnown RBP12.09□□□□□ -0.47
HSPG2-213ENST00000498495 TMEM205Q6UW68 189 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 MYLK4Q86YV6 388 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-213ENST00000498495 HPS6Q86YV9 775 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 SHISA5Q8N114 240 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 PTGR2Q8N8N7 351 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-213ENST00000498495 ATP6V1E2Q96A05 226 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 GAL3ST3Q96A11 431 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 TBC1D20Q96BZ9 403 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 MS4A6EQ96DS6 147 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 OR1F2PQ96R84 312 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms