RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CHST10O43529 356 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 ZNF888P0CJ79 500 aaPredicted RBP11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 SAT1P21673 171 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 MST1P26927 711 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 SCTRP47872 440 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 TUBA3CQ13748 450 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 FRG1Q14331 258 aaKnown RBP11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 USP10Q14694 798 aaKnown RBP11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 NAA30Q147X3 362 aaPredicted RBP11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 ZXDCQ2QGD7 858 aaPredicted RBP11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 CATSPEREQ5SY80 951 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 STEAP4Q687X5 459 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 TUBA3EQ6PEY2 450 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 TRMT10BQ6PF06 316 aaKnown RBP11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 CRLF3Q8IUI8 442 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 SHISA5Q8N114 240 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 NKAPQ8N5F7 415 aaKnown RBP11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 AMER2Q8N7J2 671 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 TMEM178AQ8NBL3 297 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 TRPV3Q8NET8 790 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 OR5T3Q8NGG3 340 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 ANKRD7Q92527 254 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 KCTD12Q96CX2 325 aaKnown RBP11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 MOCOSQ96EN8 888 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 CAPZA3Q96KX2 299 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 TSNARE1Q96NA8 513 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 OLFM1Q99784 485 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 PRR14Q9BWN1 585 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 RUBCNLQ9H714 662 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 PELI2Q9HAT8 420 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 CLK4Q9HAZ1 481 aaKnown RBP11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 LANCL2Q9NS86 450 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 ENTPD4Q9Y227 616 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 TEX264Q9Y6I9 313 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 KCNE2Q9Y6J6 123 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 UNC79Q9P2D8 2635 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 ENO4A6NNW6 628 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 PRSS44E7EML9 344 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 PSMD12O00232 456 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 CCL21O00585 134 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 CDK2AP1O14519 115 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 NDC80O14777 642 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 PRMT3O60678 531 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 B4GALT2O60909 372 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 ZNF37AP17032 561 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 EEF1DP29692 281 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 CD96P40200 585 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 HNMTP50135 292 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 PGGT1BP53609 377 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 ITGA8P53708 1063 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 SLC26A5P58743 744 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 OLR1P78380 273 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 REEP5Q00765 189 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 OC90Q02509 493 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 MGAT5Q09328 741 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 ILF2Q12905 390 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 RBBP5Q15291 538 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 OR1C1Q15619 314 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 SP5Q6BEB4 398 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 NXPE4Q6UWF7 544 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 SBSNQ6UWP8 590 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 THSD4Q6ZMP0 1018 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 FRA10AC1Q70Z53 315 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 TMPRSS11BQ86T26 416 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 THOC6Q86W42 341 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 ANKMY2Q8IV38 441 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 CYP4X1Q8N118 509 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 LGI4Q8N135 537 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 FAM98AQ8NCA5 519 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 ARMC2Q8NEN0 867 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 TSLPQ969D9 159 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 VPS39Q96JC1 886 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 PWWP2AQ96N64 755 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 PTCHD1Q96NR3 888 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 EGFL8Q99944 293 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 PLAC1Q9HBJ0 212 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 KLHL1Q9NR64 748 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 ANKRD10Q9NXR5 420 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 NSMCE4AQ9NXX6 385 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 SLC22A14Q9Y267 594 aa11.05□□□□□ -0.64
NUDCD3-211ENST00000497978 FAM95CA0A1B0GW59 222 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 ARHGAP10A1A4S6 786 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 NPEPPSL1A6NEC2 478 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 GABRR3A8MPY1 467 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 FAM227AF5H4B4 570 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 CCDC188H7C350 402 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 CDC7O00311 574 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 H2AFYO75367 372 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 RNH1P13489 461 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 HNF4AP41235 474 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 PAFAH1B1P43034 410 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 CA7P43166 264 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 SLC12A2P55011 1212 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 CDKL1Q00532 357 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 PMP22Q01453 160 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 ALDH6A1Q02252 535 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 PDIA2Q13087 525 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 ART3Q13508 389 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 PPP1R3AQ16821 1122 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 TUSC1Q2TAM9 212 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms