RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	AP1M2	Q9Y6Q5	423 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	MAU2	Q9Y6X3	613 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	EML6	Q6ZMW3	1958 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	NOTCH2	Q04721	2471 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368		A0A0J9YVX5	310 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368		C9J4A7	227 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368		H0YGG7	62 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	AGPS	O00116	658 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	QSOX1	O00391	747 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	HAT1	O14929	419 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	NPHS1	O60500	1241 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	DPM1	O60762	260 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	DNAJB6	O75190	326 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	JRK	O75564	520 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	ZNF189	O75820	626 aa	Predicted RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	VAPB	O95292	243 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	HBQ1	P09105	142 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	OGN	P20774	298 aa	Known RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	IMPA1	P29218	277 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	FMO4	P31512	558 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	STIP1	P31948	543 aa	Known RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	DCT	P40126	519 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	LIMS1	P48059	325 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	VPS41	P49754	854 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	TERF1	P54274	439 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	ADAR	P55265	1226 aa	Known RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	ARF3	P61204	181 aa	Predicted RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	PRAME	P78395	509 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	BASP1	P80723	227 aa	Known RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	KLC1	Q07866	573 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	SF1	Q15637	639 aa	Known RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	KLHL38	Q2WGJ6	581 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	FASTKD1	Q53R41	847 aa	Known RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	VWA2	Q5GFL6	755 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	WASHC2D	Q5SRD0	308 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	RBM20	Q5T481	1227 aa	Known RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	LCE4A	Q5TA78	99 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	LYPLAL1	Q5VWZ2	237 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	ATG9B	Q674R7	924 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	TLDC1	Q6P9B6	456 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	PIWIL4	Q7Z3Z4	852 aa	Known RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	PDSS2	Q86YH6	399 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	CISD2	Q8N5K1	135 aa	Known RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	NAT8L	Q8N9F0	302 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	STT3B	Q8TCJ2	826 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	PPP4R1	Q8TF05	950 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	SSC4D	Q8WTU2	575 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	COG1	Q8WTW3	980 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	ASZ1	Q8WWH4	475 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	ZNF669	Q96BR6	464 aa	Predicted RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	OR2A5	Q96R48	311 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	SLX1A	Q9BQ83	275 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	SELENOS	Q9BQE4	189 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	IL22	Q9GZX6	179 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	LZTFL1	Q9NQ48	299 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	FBXO6	Q9NRD1	293 aa	Predicted RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	SPATA7	Q9P0W8	599 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	C5AR2	Q9P296	337 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	GNPTG	Q9UJJ9	305 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	SERTAD3	Q9UJW9	196 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	B3GNT3	Q9Y2A9	372 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	PADI2	Q9Y2J8	665 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	CRYL1	Q9Y2S2	319 aa		5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	TEP1	Q99973	2627 aa	Known RBP	5.22	□□□□□ -1.57
UBE3C-208	ENST00000497368	DNHD1	Q96M86	4753 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	LOC102723996	A0A087X1L8	192 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	IGHV1-45	A0A0A0MS14	117 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	OR2W5	A6NFC9	320 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	TARM1	B6A8C7	271 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368		E7ENX8	843 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	GFY	I3L273	518 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	KIF5C	O60282	957 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	AGFG2	O95081	481 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	IPO7	O95373	1038 aa	Known RBP	5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	SLC16A8	O95907	504 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	APOA4	P06727	396 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	SNRPB2	P08579	225 aa	Known RBP	5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	PRF1	P14222	555 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	PKM	P14618	531 aa	Known RBP	5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	AGXT	P21549	392 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	IVD	P26440	423 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	COIL	P38432	576 aa	Predicted RBP	5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	SLC26A3	P40879	764 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	ECI1	P42126	302 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	SKIV2L2	P42285	1042 aa	Known RBP	5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	TSFM	P43897	325 aa	Known RBP	5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	TTPA	P49638	278 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	TBPL1	P62380	186 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	MAT1A	Q00266	395 aa	Known RBP	5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	PLOD1	Q02809	727 aa	Predicted RBP	5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	TAP2	Q03519	686 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	EEF1A2	Q05639	463 aa	Known RBP	5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	CTBP1	Q13363	440 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	RPS6KA1	Q15418	735 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	CDSN	Q15517	529 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	PHKG1	Q16816	387 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	PRSS53	Q2L4Q9	553 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	VMAC	Q2NL98	169 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	TUBB8	Q3ZCM7	444 aa		5.21	□□□□□ -1.58
UBE3C-208	ENST00000497368	ANKRD20A4	Q4UJ75	823 aa		5.21	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms