RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ALKBH7Q9BT30 221 aaPredicted RBP3.29□□□□□ -1.88
CLK1-214ENST00000496205 KRT23Q9C075 422 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 SDCBP2Q9H190 292 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 HSD3B7Q9H2F3 369 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 CHST11Q9NPF2 352 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 ZNF71Q9NQZ8 489 aaPredicted RBP3.29□□□□□ -1.88
CLK1-214ENST00000496205 DNAJC11Q9NVH1 559 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 HMG20BQ9P0W2 317 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 FBXL5Q9UKA1 691 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 GMEB2Q9UKD1 530 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 KCNJ14Q9UNX9 436 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 NSG2Q9Y328 171 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 RRP15Q9Y3B9 282 aaKnown RBP3.29□□□□□ -1.88
CLK1-214ENST00000496205 TEX264Q9Y6I9 313 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 MSGN1A6NI15 193 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 SMIM1B2RUZ4 78 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 TMEM150CB9EJG8 249 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ATP9AO75110 1047 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 TRMUO75648 421 aaKnown RBP3.28□□□□□ -1.88
CLK1-214ENST00000496205 BCAS2O75934 225 aaPredicted RBP3.28□□□□□ -1.88
CLK1-214ENST00000496205 C9P02748 559 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 CYP2A7P20853 494 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ANOS1P23352 680 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ITGA3P26006 1051 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ALDH4A1P30038 563 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 SRD5A2P31213 254 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 MAP2K2P36507 400 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 IER3P46695 156 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 NPBWR1P48145 328 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 DNA2P51530 1060 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ATP12AP54707 1039 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 UCP2P55851 309 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 OR1D5P58170 312 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 SLC26A5P58743 744 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 CDR2Q01850 454 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 OPCMLQ14982 345 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 WSCD2Q2TBF2 565 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ACCSLQ4AC99 568 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ZNF542PQ5EBM4 170 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 TEX35Q5T0J7 233 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 C20orf194Q5TEA3 1177 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 C12orf60Q5U649 245 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 SLC35E4Q6ICL7 350 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 PPP1R42Q7Z4L9 355 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 TMEM110Q86TL2 294 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ASPGQ86U10 573 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ANKRD46Q86W74 232 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 SMYD1Q8NB12 490 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ZBTB44Q8NCP5 570 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 OR13C3Q8NGS6 347 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 OR1L3Q8NH93 324 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 CCDC110Q8TBZ0 833 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 LRRC8CQ8TDW0 803 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ST7LQ8TDW4 575 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 APOBEC4Q8WW27 367 aaKnown RBP3.28□□□□□ -1.88
CLK1-214ENST00000496205 AP2M1Q96CW1 435 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 C10orf90Q96M02 699 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 RUFY1Q96T51 708 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 KCNK16Q96T55 309 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 TRIM7Q9C029 511 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 EGLN3Q9H6Z9 239 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 ECHDC1Q9NTX5 307 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 FAM118AQ9NWS6 357 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 CYP39A1Q9NYL5 469 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 FLRT3Q9NZU0 649 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 TRPC4Q9UBN4 977 aa3.28□□□□□ -1.88
CLK1-214ENST00000496205 STK36Q9NRP7 1315 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 A0A087X0K7 114 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 SYCE3A1L190 88 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 FAM172BPA6NC97 362 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 PALMO75781 387 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 OPN1MWP04001 364 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 SBK2P0C263 348 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 PATE4P0C8F1 98 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 ZNF883P0CG24 379 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 C8orf89P0DMQ9 161 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 OPN1MW2P0DN77 364 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 OPN1MW3P0DN78 364 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 CCNA2P20248 432 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 ADSSP30520 456 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 ASMTP46597 345 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 SERPINH1P50454 418 aaKnown RBP3.27□□□□□ -1.89
CLK1-214ENST00000496205 CLDN17P56750 224 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 FKBP1BP68106 108 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 AKAP17AQ02040 695 aaKnown RBP3.27□□□□□ -1.89
CLK1-214ENST00000496205 SP3Q02447 781 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 KLHL30Q0D2K2 578 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 TRA2AQ13595 282 aaKnown RBP eCLIP3.27□□□□□ -1.89
CLK1-214ENST00000496205 KIAA1644Q3SXP7 199 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 ARHGEF16Q5VV41 709 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 OLFM4Q6UX06 510 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 CEACAM20Q6UY09 585 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 LEKR1Q6ZMV7 388 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 SH2D5Q6ZV89 423 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 SERPINA12Q8IW75 414 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 RCOR2Q8IZ40 523 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 DCLK2Q8N568 766 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 WDSUB1Q8N9V3 476 aa3.27□□□□□ -1.89
CLK1-214ENST00000496205 CLEC1AQ8NC01 280 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms