RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 IFNA8P32881 189 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 DLSTP36957 453 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 ETV4P43268 484 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 KCNJ1P48048 391 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 KPNA2P52292 529 aaKnown RBP7.86□□□□□ -1.15
HDAC6-234ENST00000493923 GEMP55040 296 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 GALNT1Q10472 559 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-234ENST00000493923 PDIA2Q13087 525 aaKnown RBP7.86□□□□□ -1.15
HDAC6-234ENST00000493923 GTF2H3Q13889 308 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SELPLGQ14242 412 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 TAF1AQ15573 450 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-234ENST00000493923 GPR19Q15760 415 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 BCL7AQ4VC05 210 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 TIGD2Q4W5G0 525 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 TMTC4Q5T4D3 741 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 NDUFAF5Q5TEU4 345 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 KCTD11Q693B1 232 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 DARS2Q6PI48 645 aaKnown RBP7.86□□□□□ -1.15
HDAC6-234ENST00000493923 C6orf15Q6UXA7 325 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-234ENST00000493923 NAPRTQ6XQN6 538 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 FAM20CQ8IXL6 584 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 PIANPQ8IYJ0 282 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 LSMEM1Q8N8F7 131 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SLC38A9Q8NBW4 561 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SIMC1Q8NDZ2 872 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 RAB2BQ8WUD1 216 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SDCCAG3Q96C92 435 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 ABHD17AQ96GS6 310 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 ZNF486Q96H40 463 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SLC41A2Q96JW4 573 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 C12orf66Q96MD2 445 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SPATA13Q96N96 652 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 VAT1Q99536 393 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 TBL1YQ9BQ87 522 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 FSD1LQ9BXM9 530 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 ANKRD60Q9BZ19 345 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 CLMPQ9H6B4 373 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 ASB8Q9H765 288 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 RPF2Q9H7B2 306 aaKnown RBP7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SP140LQ9H930 580 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 ANKHQ9HCJ1 492 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 THAP1Q9NVV9 213 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 ARMCX1Q9P291 453 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 RIMS3Q9UJD0 308 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 PKP3Q9Y446 797 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 PCDHGA11Q9Y5H2 935 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 PRSS21Q9Y6M0 314 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 CNTRLQ7Z7A1 2325 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 HIVEP3Q5T1R4 2406 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 ANKRD12Q6UB98 2062 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 TRBV5-4A0A0C4DH59 114 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 PRSS51A0A1B0GVH4 220 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 WDR91A4D1P6 747 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 OR5K3A6NET4 321 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 TRIM64A6NGJ6 449 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 BTN3A3O00478 584 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 COPEO14579 308 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 HAT1O14929 419 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 CLOCKO15516 846 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 HCRTR1O43613 425 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 MAN1A2O60476 641 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 KATNA1O75449 491 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 JRKO75564 520 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 CTSBP07858 339 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 ABCB1P08183 1280 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-234ENST00000493923 PVRP15151 417 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 POLR2CP19387 275 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-234ENST00000493923 BGNP21810 368 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 TCEA1P23193 301 aaKnown RBP7.85□□□□□ -1.15
HDAC6-234ENST00000493923 IL32P24001 234 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 PREPP48147 710 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 SERPINB10P48595 397 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 HK2P52789 917 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 IST1P53990 364 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 TLE1Q04724 770 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 ABRQ12979 859 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 KLF1Q13351 362 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-234ENST00000493923 DNASE1L3Q13609 305 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 ERV3-1Q14264 604 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 HERC3Q15034 1050 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 FXNQ16595 210 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 CPZQ66K79 652 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 RNF111Q6ZNA4 994 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 GSTA5Q7RTV2 222 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 LACC1Q8IV20 430 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 RASGRP3Q8IV61 690 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 CDKL3Q8IVW4 592 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-234ENST00000493923 CTAGE3PQ8IX95 158 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 CFAP206Q8IYR0 622 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 NXPE1Q8N323 547 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 GALNT4Q8N4A0 578 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 CLDN19Q8N6F1 224 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 TMCO5AQ8N6Q1 288 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 FAM71DQ8N9W8 422 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 LMNTD1Q8N9Z9 388 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 OR2L2Q8NH16 312 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 BRSK1Q8TDC3 778 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 ATG4AQ8WYN0 398 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 CLPTM1LQ96KA5 538 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 CEP19Q96LK0 163 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms