RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 LRRC61Q9BV99 259 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 GSDMCQ9BYG8 508 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ARRDC1-AS1Q9H2J1 176 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 SLC6A15Q9H2J7 730 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 DPEP2Q9H4A9 486 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PARVBQ9HBI1 364 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ING3Q9NXR8 418 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 CD274Q9NZQ7 290 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 TAAR2Q9P1P5 351 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 COPG2Q9UBF2 871 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 APOBEC3BQ9UH17 382 aaKnown RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 OARD1Q9Y530 152 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ZFC3H1O60293 1989 aaKnown RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 LRP4O75096 1905 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ASCC3Q8N3C0 2202 aaKnown RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 CACNA1AO00555 2505 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 CCDC189A1A4V9 331 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 A6NCN8 305 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 OR52A4PA6NMU1 304 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 SYCE1LA8MT33 242 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 A8MT66 165 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 LMO7DNF2Z398 122 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 MATN2O00339 956 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 IFRD1O00458 451 aaPredicted RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 FFAR2O15552 330 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 CDC14BO60729 498 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 SDC3O75056 442 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 TMEM127O75204 238 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 PIAS2O75928 621 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 SNUPNO95149 360 aaKnown RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 SIX3O95343 332 aaPredicted RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 LMNAP02545 664 aaKnown RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 CATP04040 527 aaKnown RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 FGF3P11487 239 aaPredicted RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 NEFHP12036 1026 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 GFAPP14136 432 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 BGNP21810 368 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 CCR10P46092 362 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 RXRGP48443 463 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 AGTR2P50052 363 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 PRKAA2P54646 552 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 NAGLUP54802 743 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 IL9RQ01113 521 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 GRB7Q14451 532 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 KRT33BQ14525 404 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 ODF1Q14990 250 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 TGFBIQ15582 683 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 ZXDCQ2QGD7 858 aaPredicted RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 HLA-BQ31612 363 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 UNC50Q53HI1 259 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 IYDQ6PHW0 289 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 UNC5DQ6UXZ4 953 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 WASH2PQ6VEQ5 465 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 ZCCHC23Q6ZST2 131 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 FRA10AC1Q70Z53 315 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 RPS27LQ71UM5 84 aaKnown RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 MTERF4Q7Z6M4 381 aaKnown RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 SLC25A45Q8N413 288 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 FBXO39Q8N4B4 442 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 CCNYL1Q8N7R7 359 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 PTGR2Q8N8N7 351 aaPredicted RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 ZNF548Q8NEK5 533 aaPredicted RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 OR2I1PQ8NGU4 316 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 CEP76Q8TAP6 659 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 DYDC1Q8WWB3 177 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 CFHR4Q92496 578 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 ESAMQ96AP7 390 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 C12orf66Q96MD2 445 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 PKP4Q99569 1192 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 GATA5Q9BWX5 397 aaPredicted RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 TRIM54Q9BYV2 358 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 ERVMER34-1Q9H9K5 563 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 SEC61A2Q9H9S3 476 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 IL21RQ9HBE5 538 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 RDH14Q9HBH5 336 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 WASH6PQ9NQA3 447 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 DMRT3Q9NQL9 472 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 IMP3Q9NV31 184 aaKnown RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 ARL15Q9NXU5 204 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 NCKIPSDQ9NZQ3 722 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 ZNF624Q9P2J8 865 aaPredicted RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 NCDNQ9UBB6 729 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 SPASTQ9UBP0 616 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 PTBP2Q9UKA9 531 aaKnown RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 RAB23Q9ULC3 237 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 PLAGL1Q9UM63 463 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 OAZ3Q9UMX2 235 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 ASF1AQ9Y294 204 aa6.33□□□□□ -1.4
TRA2B-216ENST00000493864 TDRKHQ9Y2W6 561 aaKnown RBP6.33□□□□□ -1.4
TRA2B-216ENST00000493864 ASXL3Q9C0F0 2248 aa6.32□□□□□ -1.4
TRA2B-216ENST00000493864 TCP11X1B4DZS4 312 aa6.32□□□□□ -1.4
TRA2B-216ENST00000493864 AQP9O43315 295 aa6.32□□□□□ -1.4
TRA2B-216ENST00000493864 ITM2AO43736 263 aa6.32□□□□□ -1.4
TRA2B-216ENST00000493864 KLK8O60259 260 aa6.32□□□□□ -1.4
TRA2B-216ENST00000493864 IPO13O94829 963 aaKnown RBP6.32□□□□□ -1.4
TRA2B-216ENST00000493864 EPN2O95208 641 aa6.32□□□□□ -1.4
TRA2B-216ENST00000493864 PLATP00750 562 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms