RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 NSMCE3Q96MG7 304 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 CCDC68Q9H2F9 335 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 FAM207AQ9NSI2 230 aaPredicted RBP3.17□□□□□ -1.9
CD46-217ENST00000493796 OR6C2Q9NZP2 312 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 ABT1Q9ULW3 272 aaKnown RBP3.17□□□□□ -1.9
CD46-217ENST00000493796 STUB1Q9UNE7 303 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 PPP1R3CQ9UQK1 317 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 PADI2Q9Y2J8 665 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 PPP2R2CQ9Y2T4 447 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 ANGPTL3Q9Y5C1 460 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 SNX8Q9Y5X2 465 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 SMAD5-AS1Q9Y6J3 95 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 PLXNA1Q9UIW2 1896 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 ASTN1O14525 1302 aa3.17□□□□□ -1.9
CD46-217ENST00000493796 CHD7Q9P2D1 2997 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 ROBO3Q96MS0 1386 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 E7EWF7 191 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 CYTH3O43739 400 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 CDK2AP2O75956 126 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 DDHD2O94830 711 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 IGHV2-70P01814 119 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 LINGO3P0C6S8 592 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 ZSCAN5DPP0CG00 497 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 HAPLN1P10915 354 aaPredicted RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 FDPSP14324 419 aaKnown RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 PFKFB1P16118 471 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 ZNF10P21506 573 aaPredicted RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 MPZP25189 248 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 RPS12P25398 132 aaKnown RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 HSPA4P34932 840 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 OPRL1P41146 370 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 DSCR10P59022 87 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 GCNT1Q02742 428 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 VGLL4Q14135 290 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 UGT3A2Q3SY77 523 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 SBK1Q52WX2 424 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 WLSQ5T9L3 541 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 DOK6Q6PKX4 331 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 SLC25A47Q6Q0C1 308 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 Q6ZRP5 223 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 BTN2A1Q7KYR7 527 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 ARHGAP22Q7Z5H3 698 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 DZIP1Q86YF9 867 aaKnown RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 SYT2Q8N9I0 419 aaPredicted RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 TSPAN14Q8NG11 270 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 VANGL1Q8TAA9 524 aaPredicted RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 FAM222BQ8WU58 562 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 SYN2Q92777 582 aaPredicted RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 NXNL1Q96CM4 212 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 FAM20AQ96MK3 541 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 GCNAQ96QF7 691 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 USP28Q96RU2 1077 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 ABHD1Q96SE0 405 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 SEPHS2Q99611 448 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 UPF3BQ9BZI7 483 aaKnown RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 THAP2Q9H0W7 228 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 GOLPH3LQ9H4A5 285 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 TRPV4Q9HBA0 871 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 PPANQ9NQ55 473 aaKnown RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 MAN2C1Q9NTJ4 1040 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 PRMT7Q9NVM4 692 aaPredicted RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 CHORDC1Q9UHD1 332 aaPredicted RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 FBXO2Q9UK22 296 aaPredicted RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 PPIEQ9UNP9 301 aaKnown RBP3.16□□□□□ -1.9
CD46-217ENST00000493796 ALPK3Q96L96 1907 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 RAD50Q92878 1312 aa3.16□□□□□ -1.9
CD46-217ENST00000493796 CDH23Q9H251 3354 aa3.15□□□□□ -1.9
CD46-217ENST00000493796 PRUNE2Q8WUY3 3088 aa3.15□□□□□ -1.9
CD46-217ENST00000493796 TP53BP1Q12888 1972 aaPredicted RBP3.15□□□□□ -1.91
CD46-217ENST00000493796 MEX3AA1L020 520 aaKnown RBP3.15□□□□□ -1.91
CD46-217ENST00000493796 NEMP2A6NFY4 417 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 C15orf61A6NNL5 157 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.15□□□□□ -1.91
CD46-217ENST00000493796 RANBP6O60518 1105 aaKnown RBP3.15□□□□□ -1.91
CD46-217ENST00000493796 CELF2O95319 508 aaKnown RBP3.15□□□□□ -1.91
CD46-217ENST00000493796 SEC24AO95486 1093 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 VTNP04004 478 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 GOLGA8HP0CJ92 632 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 CYP2A7P20853 494 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 UGT1A4P22310 534 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 CSTF2P33240 577 aaKnown RBP eCLIP3.15□□□□□ -1.91
CD46-217ENST00000493796 MMP12P39900 470 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 HNF4AP41235 474 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 MTHFRP42898 656 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 ZNF75DP51815 510 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 UBXN2AP68543 259 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 E2F5Q15329 346 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 SNAI3Q3KNW1 292 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 SLC35D3Q5M8T2 416 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 FAM198BQ6UWH4 519 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 USP50Q70EL3 339 aaPredicted RBP3.15□□□□□ -1.91
CD46-217ENST00000493796 LRRTM1Q86UE6 522 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 SPEM1Q8N4L4 309 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 NECAB1Q8N987 351 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 THAP8Q8NA92 274 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 GPRC5AQ8NFJ5 357 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 OR1L3Q8NH93 324 aa3.15□□□□□ -1.91
CD46-217ENST00000493796 SMAP2Q8WU79 429 aaPredicted RBP3.15□□□□□ -1.91
CD46-217ENST00000493796 ATL1Q8WXF7 558 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms